Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4776g00001 ATGGACTCCGAGCAGTTTATTGGTTTCAATGTGACTAATTCAGCAGGAACACCTTACCCATCATCTTCTTATCCTACTATTCCACCGATACCACACCGGCTACTTGGGTCCTTGAAACTTGACATAGGGAACTCACCTAATTCTGCCCTTTCAACTCATTTTGATTCTGATACTCTTTCTGATACTTCTTGTAACTCTTTGCTTGAAAGCAGTCATTATTTGCATAGGCCAGTCCCATCTGTAGACCATCTCCAGGATGGTTTACATCTATATTCTGCTTGGAGCTCTCTTCCACAGGATGCAAGTTGTGACCAGAAAACCAAACACACATTGCTGGAACTAGAAACTGCTTTGATGGCGCCTGATCGTGATGATGAAGCTACTGCATCAAATACTTCTTTAGGTGGTAGCAGCAGGCCAACAACATCTGGCCAAAGAAATGGGTCAGAATCTATTCAAAGTCAGCCATCTTATGTTGTTAGCAGTAGGCAATCAAGTGAAGTTGCACGTGTAGAGAAACGTCACAAGTCAATGGAGGAAACATCACTACAAGGCTTCCCGTCAAGCAATTTGAAACAATTGCTTATTGTATGTGCCAAAGCTTTGTCTGACAACGAAATGAAAGATTTTGATCAATTGATAGAAAAGGCTAGAAGTGCTGTATCTATAAGTGGGGATCCAATCCAACGGCTTGGTGCTTATTTGGTAGAAGGGCTTGTTGCAAGGAAGGAGGCATCGGGGAATAACATCTATCGTGCCCTTAGGTGCAGAGAGCCTATGGGCAAAGACTTACTCTCTTACATGCAGATACTCTATGAAATCTGTCCATACTTAAAATTTGGTTACATGGCTGCCAATGGGGCTATTGCTGAAGCTTGCAGAAATGAGGATCACATTCACATTATAGACTTTCAGATTGCTCAGGGAACTCAATGGATGACTCTCCTTCAAGCTTTTGCAGCAAGACCTGGTGGGGCTCCACATGTACGGATCACGGGGATTGATGACCCTCTTTCTAAATATGCTCGTGGTGATGGACTAGATGCTGTTGGGAAAAGATTGGCTGTAATCTCTGAGAAATTTGGCATCCCAGTTGAGTTCCATGGTGTCCCAGTTTTAGCACCAGATGTGACAAGAGACATGCTTGATGTCAGGCCTGGAGAGGCTTTAGCTGTGAACTTTCCTCTGCAACTCCATCATACTGCTGATGAGAGTGTTGATGTGAGTAATCCAAGGGATGGACTTCTAAGAATGGTAAAATCACTTTCTCCCAAGGTAGTTACATTGGTGGAGCAGGAATCAAACACAAATACAACTCCTTTCTTCAACAGGTTTATAGAAACTCTGGATTACTACTTGGCAATATTTGAGTCCATTGATGTTACTTTCCCAAGAAAGAGCAAGGAGCGGATTAATGTGGAGCAACATTGTCTGGCCCGGGATATTGTGAACATTATTGCTTGTGAAGGGAAGGAAAGGGTAGAGCGGCATGAACTGTTTGGCAAGTGGAAGTCAAGGTTCACAATGGCTGGCTTCCATCAATATCCTTTGAGTTCTTATGTGAATTCGGTTATAAGAAGCCTGCTGAGGTGCTATTCAGAACATTATAGTCTGGTGGAGAAGGATGGGGCCATGTTGTTAGGATGGAAGAACAGAAATTTGATATCAGCTTCTGCCTGGCATTGA 1686 0.4324 MDSEQFIGFNVTNSAGTPYPSSSYPTIPPIPHRLLGSLKLDIGNSPNSALSTHFDSDTLSDTSCNSLLESSHYLHRPVPSVDHLQDGLHLYSAWSSLPQDASCDQKTKHTLLELETALMAPDRDDEATASNTSLGGSSRPTTSGQRNGSESIQSQPSYVVSSRQSSEVARVEKRHKSMEETSLQGFPSSNLKQLLIVCAKALSDNEMKDFDQLIEKARSAVSISGDPIQRLGAYLVEGLVARKEASGNNIYRALRCREPMGKDLLSYMQILYEICPYLKFGYMAANGAIAEACRNEDHIHIIDFQIAQGTQWMTLLQAFAARPGGAPHVRITGIDDPLSKYARGDGLDAVGKRLAVISEKFGIPVEFHGVPVLAPDVTRDMLDVRPGEALAVNFPLQLHHTADESVDVSNPRDGLLRMVKSLSPKVVTLVEQESNTNTTPFFNRFIETLDYYLAIFESIDVTFPRKSKERINVEQHCLARDIVNIIACEGKERVERHELFGKWKSRFTMAGFHQYPLSSYVNSVIRSLLRCYSEHYSLVEKDGAMLLGWKNRNLISASAWH 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4776g00001 561 MobiDBLite consensus disorder prediction 118 183 - -
Gabi4776g00001 561 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 162 557 IPR005202 -
Gabi4776g00001 561 ProSiteProfiles GRAS family profile. 182 561 IPR005202 -
Gabi4776g00001 561 MobiDBLite consensus disorder prediction 126 166 - -
Gabi4776g00001 561 Pfam GRAS domain family 191 560 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4776g00001 Gabi-Chr4776 31446 35192 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4776g00001 91 560 GRAS Transcription Factor Family AT5G48150 54.812 5.18e-179 512
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gabi4776g00001 GRAS 4.1e-128 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4776g00001 - - gmx:100775665 907.131