Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4767g00004 ATGGGTTGTTGTGTCTCCACAAGCAGTAGGAGTACTTGTAGCAGTAGGAGCAATGGAGACATGGTTTCTCCATCTTGCTTAGAAGTTGGATTCTGTGGGCAAAAGAGAGCAAGGAGAACATTCTCTGATCATGTTATTTCTCTACACCATTTACCATCCTTACCTAGCAGAATTTTCACTAATGGAAAGAGCCGAGCTTCTTGCATATTTACGCAGCAGGGCCGCAAGGGCATTAATCAGGATGCCATGATTGTGTGGGAAGATTTCATGTCTGAAGATATGATCTTTTGCGGCGTCTTTGATGGCCATGGTCCACAAGGTCATCTTGTTGCACGCAAAGTGAGGGATGCCTTGCCAGTAAAACTGCTTTCATTTTTGCATTCTTGTGAATCAAAGCGAAATGGGTCAGGTAAAGCTTGCTTCAAAGGGAACATAAAACCTGATAGCAGAGACTCAGAGAAGGATTGCTCTACTGAGGATAAGCTGAACTCTACATGGAGAGAAGCTTTCATGAAGGCATACAAGGCCATGGACAAAGAGCTCAGGTCTCATCCAAATCTGGATTGCTTCTGTAGTGGGAGCACAGCTGTGACTATAGTTAAGCAGGGATCAAATCTGTTCATGAGCTATATTGGGGATTCTCGAGCAATCATGGGATCCAAGGACAGCAATAATTCCATGGTGGCAATTCAGTTGACTGTTGATTTGAAGCCTGATTTGCCAAGGGAAGCAGAAAGAATTAAGCGGTGCAAGGGTAGGGTATTTGCTTTGCAAGATGAGCCGGAAGTGCCTAGGGTATGGTTGCCTTTTGATGATGCACCAGGATTAGCAATGGCTAGAGCATTTGGAGATTTCTGTTTGAAGGAGTATGGTGTGATTTCTATACCTGAATTTTCTCACCGGCTGCTTACAGACAGAGATCAATTCATTGTTCTTGCCTCAGATGGGGTTTGGGATGTTTTAAGCAATGAGGAGGTGGTTGAGATAGTATCATCAGCACCAACACGATCATCGGCAGCAAGGATTCTGGTGGATTCTGCTGCTCGGGAGTGGAAACTCAAATACCCCACTTCAAAAATGGATGACTGTGCTGTGGTGTGCTTATTTTTGGATGGGAAAATGGACTCAGAATCTGATTATGATGAACAAGGCTTTTCTTCTGCAACCATCCAGAGCAACCATTCGGGTAATCCAATGGAATCTGATGATGGACAAAAGTCTGAGCCATCATTGCAAAGGAACTTTACTGTGAGATCCTCAGAAGAAAATGAGAATGATGGAGCACGATGTGTTGAAGTTGAAGATGGAACATCATCAGCTGATGATCAAAACTGGTCAGGTTTGGAGGGTGTCACCCGTGTAAACTCACTCGTCCAACTTCCTAGATTTTCTGAGGAAAGGCCAAAAATCTTGAATTTGTTGGTTTAA 1428 0.4384 MGCCVSTSSRSTCSSRSNGDMVSPSCLEVGFCGQKRARRTFSDHVISLHHLPSLPSRIFTNGKSRASCIFTQQGRKGINQDAMIVWEDFMSEDMIFCGVFDGHGPQGHLVARKVRDALPVKLLSFLHSCESKRNGSGKACFKGNIKPDSRDSEKDCSTEDKLNSTWREAFMKAYKAMDKELRSHPNLDCFCSGSTAVTIVKQGSNLFMSYIGDSRAIMGSKDSNNSMVAIQLTVDLKPDLPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRLLTDRDQFIVLASDGVWDVLSNEEVVEIVSSAPTRSSAARILVDSAAREWKLKYPTSKMDDCAVVCLFLDGKMDSESDYDEQGFSSATIQSNHSGNPMESDDGQKSEPSLQRNFTVRSSEENENDGARCVEVEDGTSSADDQNWSGLEGVTRVNSLVQLPRFSEERPKILNLLV 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4767g00004 475 MobiDBLite consensus disorder prediction 1 21 - -
Gabi4767g00004 475 ProSiteProfiles PPM-type phosphatase domain profile. 66 370 IPR001932 -
Gabi4767g00004 475 PANTHER PROTEIN PHOSPHATASE 66 368 IPR015655 GO:0004722|GO:0006470
Gabi4767g00004 475 CDD PP2Cc 72 370 IPR001932 -
Gabi4767g00004 475 MobiDBLite consensus disorder prediction 381 418 - -
Gabi4767g00004 475 Pfam Protein phosphatase 2C 142 347 IPR001932 -
Gabi4767g00004 475 SMART PP2C_4 55 368 IPR001932 -
Gabi4767g00004 475 FunFam probable protein phosphatase 2C 52 57 373 - -
Gabi4767g00004 475 SUPERFAMILY PP2C-like 58 372 IPR036457 -
Gabi4767g00004 475 Gene3D - 58 378 IPR036457 -
Gabi4767g00004 475 MobiDBLite consensus disorder prediction 380 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4767g00004 Gabi-Chr4767 67853 72526 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4767g00004 1 469 PP2C-type Phosphatase Gene Family AT1G03590 68.595 0.0 632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4767g00004 - - gmx:100798340 881.708