Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4766g00068 ATGGATCATCAAGGGCATAGCCAGAACCCATCTATGGGGGTTGTCGGGAGTGGAGCTCAATTGACGTACGGTTCTAACCCATATCAGCCAAGCCAGATAACTGGGCCTCCTGGATCGGTTGTTACATCAGTTGGGACCATTCAATCCTCCGGTCAACCTGCTGGAGCTCAGCTGGGACAGCATCAACTTGCTTATCAGCATATTCATCAGCAACAACAGCAGCAACTTCAGCAACAGCTCCAGGCCTTTTGGGCAAATCAATACCAAGAAATTGAGAAGGTTACTGATTTCAAGAACCACAGTCTTCCCCTGGCTAGGATCAAGAAGATTATGAAGGCTGATGAGGATGTTAGAATGATATCAGCTGAGGCACCTGTCATATTTGCAAGGGCATGTGAAATGTTCATATTAGAGTTAACCCTGCGTTCTTGGAATCACACTGAAGAGAACAAAAGGAGAACACTTCAAAAAAATGATATTGCAGCAGCAATCACAAGGACTGATATCTTTGATTTCTTGGTTGACATTGTCCCTCGTGAGGATTTGAAAGATGAAGTGCTTGCTTCAATCCCAAGAGGAACAATGCCTGTTGCAGGGCCTGCTGATGCACTTCCTTATTGCTATATGCCACCCCAGCATGCTCCCCAAGTTGGAACTGCTGGTGTCATAATGGGTAAGCCTGTGATGGACCCAAATATGTATGCTCAGCAGACTCATTCATACATGGCACCACAAATGTGGCCACAGCCACCAGACCAACGACAATCATCTCCTGATCATTAG 783 0.461 MDHQGHSQNPSMGVVGSGAQLTYGSNPYQPSQITGPPGSVVTSVGTIQSSGQPAGAQLGQHQLAYQHIHQQQQQQLQQQLQAFWANQYQEIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLASIPRGTMPVAGPADALPYCYMPPQHAPQVGTAGVIMGKPVMDPNMYAQQTHSYMAPQMWPQPPDQRQSSPDH 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4766g00068 260 FunFam Nuclear transcription factor Y subunit gamma 66 179 - -
Gabi4766g00068 260 MobiDBLite consensus disorder prediction 1 42 - -
Gabi4766g00068 260 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 64 200 - -
Gabi4766g00068 260 Gene3D Histone, subunit A 63 179 IPR009072 GO:0046982
Gabi4766g00068 260 Pfam Core histone H2A/H2B/H3/H4 67 164 IPR007125 GO:0003677
Gabi4766g00068 260 SUPERFAMILY Histone-fold 71 173 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4766g00068 Gabi-Chr4766 648921 653246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4766g00068 1 237 CCAAT-HAP5 Transcription Factor Family AT1G08970 62.917 3.67e-87 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Gabi4766g00068 CBFD_NFYB_HMF 5.8e-18 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4766g00068 K08066 - gmx:100527803 434.491