Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4766g00062 ATGACTTCTCTGAGTGAACAACCACATCACGTACGAGCAAACCAAGAAGGGAAGAAATCTAATGGCTTTCTGTTTGAGGGTAAAAGAAGAGGTGAATGTAAGTGTTTGCCAAGTTACATTCCAAAAACAAAAAAGGTCCATAACCAACACCATCAAAATTTAGCCTCCAAAACCATTTTCATAAACTTAGTTACGCTCCTATTTACTACTTTTCTGGTTGTACTCATGCTCCGTCGTCTAAAATCCACGAGCAAGAAGAGAACTTGCAAAGACAATAATAGTAGAGTACTACTTCATGACATAAGTAGTAGGTTTATGGCTTCAACAGCGTTGAGCTTCAATTCTAGCCCAGATGTGAAGGGAGAGTGTCTTCACAAAAGAAATCTAAGCATGACTCCAGCACCTAAATTTCGAGGAGTGCAAGTGTTCACATATAGGGAGATAGAAGTGGCCACAGACGGATTCAGTAATGCAAATGTGATTGGCAATGGAGGCATTGGTTTGATGTACAGAGGAATCCTAAGTGATGGCACTTTGGCAGCAATTAAATTGATGCGCAGGGAAGGTAAGCAAGGGGAGCGAGCCTTCAGAATGGAGGTGGATCTCCTGAGCCGCTTGCACTCTCCATATTTGGTGGAGTTGCTTGGCTATTGTGCAGACCAACACCACAGGCTACTGATATTTGAGTACTTGCCCAATGGTACTCTTCAACAACATCTCTACTCTCCTAACAATCAAACTCAACCGTTGGATTGGTGGACACGTATGAGGATAGCCCTTGATTGTGCAATGGCTCTGGAGTTCCTGCACGAACATCCTGTCTCACCTGTCATCCACCGTGACTTCAAGTGTAGCAATGTTCTACTGGATCAAAATTTCCGTGCCAAGGTTTCAGATTTTGGATTGGTAAAAACGGGATCAAAGAAGATCAACGGTCAGGTTTCCACCCATATGTTGGGTACCTCTGGATATATGGCACCAGAGTATGCCTTCACAGGAAAGCTTACTGCAAAGTCAGATGTTTATAGCTATGGTGTGGTTCTTCTCGAGCTGCTAACAGGACGTATACCGGTTGATATTAAGAGGCCTCCTGGAGAACATTTTCTTGTCTCTTGGGCTCTTCCAAGGTTAACTGACAGAGAAAAAGTGATGGAAATGGTTGACCAAACTCTAGGGGGACAGTACTCAAAGAAGGATCTAATTCAGATAGCGGCCATTGCTGCAATGTGCATACAGCCAGAACCTGATTACAGGCCGCTAATGATGGATGTTGTACAATCACTAATACCACTTGTTAGGAACCCGCCTTCTAATAGTTCATCTAGTTCCCTAAGATTGCAGAAACAAACATCAAGTCCAACTGTCTAA 1368 0.4327 MTSLSEQPHHVRANQEGKKSNGFLFEGKRRGECKCLPSYIPKTKKVHNQHHQNLASKTIFINLVTLLFTTFLVVLMLRRLKSTSKKRTCKDNNSRVLLHDISSRFMASTALSFNSSPDVKGECLHKRNLSMTPAPKFRGVQVFTYREIEVATDGFSNANVIGNGGIGLMYRGILSDGTLAAIKLMRREGKQGERAFRMEVDLLSRLHSPYLVELLGYCADQHHRLLIFEYLPNGTLQQHLYSPNNQTQPLDWWTRMRIALDCAMALEFLHEHPVSPVIHRDFKCSNVLLDQNFRAKVSDFGLVKTGSKKINGQVSTHMLGTSGYMAPEYAFTGKLTAKSDVYSYGVVLLELLTGRIPVDIKRPPGEHFLVSWALPRLTDREKVMEMVDQTLGGQYSKKDLIQIAAIAAMCIQPEPDYRPLMMDVVQSLIPLVRNPPSNSSSSSLRLQKQTSSPTV 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4766g00062 455 MobiDBLite consensus disorder prediction 435 455 - -
Gabi4766g00062 455 Gene3D Phosphorylase Kinase; domain 1 126 230 - -
Gabi4766g00062 455 MobiDBLite consensus disorder prediction 1 21 - -
Gabi4766g00062 455 FunFam Receptor-like serine/threonine-protein kinase ALE2 231 448 - -
Gabi4766g00062 455 ProSitePatterns Serine/Threonine protein kinases active-site signature. 277 289 IPR008271 GO:0004672|GO:0006468
Gabi4766g00062 455 PANTHER OS07G0668900 PROTEIN 96 440 - -
Gabi4766g00062 455 SUPERFAMILY Protein kinase-like (PK-like) 136 428 IPR011009 -
Gabi4766g00062 455 FunFam Serine/threonine-protein kinase PBS1 124 230 - -
Gabi4766g00062 455 Gene3D Transferase(Phosphotransferase) domain 1 231 448 - -
Gabi4766g00062 455 ProSiteProfiles Protein kinase domain profile. 155 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4766g00062 455 Pfam Protein tyrosine and serine/threonine kinase 158 428 IPR001245 GO:0004672|GO:0006468
Gabi4766g00062 455 CDD STKc_IRAK 161 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4766g00062 Gabi-Chr4766 606014 608329 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4766g00062 99 453 Receptor kinase-like Gene Family AT3G58690 58.840 1.68e-150 432
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Gabi4766g00062 PK_Tyr_Ser-Thr 3.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4766g00062 - - gmx:100809810 583.178