Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4766g00030 ATGGAATGCAACAAGGATGAAGCTCTAAGGGCTAAGCAAATTGCTGAAAATAGAATGCAAAGTGGTGACTTTGTAGGGGCACTGAAGTTTGCTACAAAAGCCAAAAGACTGTTCCCTGACATTCAAAACATTGCTCAGATCCTTACTGTTTGTGAGGTTCACTGTGCTGCACAGAACAAACTCTCTGGGTCTGACATGGACTGGTATGGAATTCTTCAGACTGAACGATTCGCTGATGAAGCAACTATAAAGAAACAGTACAGGAAGCTTGCACTGTTACTTCATCCTGATAAAAATAATTCTGCTGGTGCAGAGGCTGCTTTCAAGTTGATTGGGGAAGCTAACAGAATGTTGAGTGACCAAACAAAGCGTTCTTCATATGACATAAGGATTAGAGTCCTTGGGGGAAATACAGCACCGAAGGCTCCATCCCATCACTCAAATGGGAGCTCATTTGGGTCAAAATGTGATGGAAATGCAAGAAATTATCAGAATACTTTTAATTCACACTCCCGTACTTGGAGTTCCCATCAGCGGGATGAACAGCAGACATTCTGGACATCTTGCCAACATTGTAATACTAGGTATGAGTACTACAAAACCATTGTAAATGCTACCTTACGTTGTCAACAATGTTCTAAATCCTTTAGAGCTCATGATTTGGGGCACCAGGGTGTGTCACCAGGATATACACGGTCATCATTTGATAACCAGAAAGAGGCTCCAAAGCATGTGTCACCAAAAGCAGCATCAAAAAGTAATGGTGGAAAACCTTGTGGTAGAGGACAGGAGGATAAATTTGTGCGGTCTTTTCCTGTCTCTAAGACAAAGGGTGGTGTTGAAACATCCAACCGTGCTACATCTAAAGCCAAGGAATCACAATCCTCAACAAATGTTGGAAGTAAGAGAGCAAGGCAGTCAGCATCAGATTCGAGAGATGATAACAAGGCTGGAAATGGTGTTGATCCATCTGGACTTAATGCAGGAGTACACCCTAGGAGATCTTCCAGGAAAAAGCAACATGTTTCATGCACAGAAACTGCTCAAGATGGTGATTTTGAGAGTTCTTCCAAAAGGACACAAAAATATGAATCATTTAATGCCACTGAAGTGGAGAAAAGAGAAGTGCCTGCAAGTAGTGGATTGTTCAATAACAAAAATTCAGCTAGTTTCACTGTGGGGGTGAGTGGTCAAAATGGTGACGTGAGTAACAAAGCAAGTGCCTCACTTGAAGAAACGCTCTTAAGGAATAAAATCGAAATTGAGCAGTCAAAAGTGCAAAGAAAGGATGTATCCAAGTCAGATCTTGATGATAGAAAGTCAAAAGCCGATAATTATTCTCCACTGAATCCAGATTTCCCTCCCGATTCAGAGATTTGCTGTCCTGATCCAGATTTTAGTGATTTTGAGAAAGATAGGGCAGAGGATTGTTTCGCTGCTGATCAATTCTGGGCTATTTTTGATAATAATGGTTGTATGCCTAGATTCTATGCTCTTGTCAAGGAAGTGTTCTCCCCTTTCAAGTTGCGGATTAAATGGCTGGAAGCTAACCCAGATGACCAGGGTGAGTTTGATTGGCATTGTGCAGGTTTGCCTGTTGGTTGTGGTAAGTTCGAACTTGGTCGTTCTCAGATAACTACGAATCGTGAGATGTTCTCTCATCAGATACATTGCAAAAGAGGAAGCGCCAGAGGTTCCTATCTGGTATATCCTAAGAAGGGTGAAACTTGGGCAATTTTTAGACATTGGGATATGGGATGGAGTTCTAATCCAGAAAATCATTCAGAGTATCAATTTGAATATGTGGAAGTCCTATCTGATTTTGATGAGAATGTTGGCATTAAAGTTGCTTATCTTGGCAAAGTGAAAGGGTTTGTTAGTCTCTTTCAGCAAAATGTGCAGAATGGAATTTGCTTATTTTGTGTTCCACCTAATGAGCTATATAGGTTCTCGCATCGGATTCCTTCGTATAAGATGGCTGGTGATGAAAAGGAAGGTGTTCCAAGAGGATCTTTTGAACTTGACCCTGCTGGCCTGCCTAATAGTCTTTTTGAAGTTGGTGATCCTGGTGATGTAATAAAAGAGCATGAAATGTTAAACAATGGAGTCAATTTTCCGTGCCATGAATCCTCTAAATGGAAAGTTGAACAGTCAGTGTCTAATGAGAGTATTCACAAGGCAAAGTTGCATGAGATTAATGATGCTGAAAGAGCTTCGTCAATCCTTAGAAGATCACCTCGGTCAAACCAAAAAGGTAAGGAAAATGGTCAAGCAAGCTTTAATCAATATGTTGTCAGAGAGGATGACGAAGATATTGGCTACAGGGACTACAGTCAAACTGAGGGAATCACTGCTGCATGTCAGACTAATGAGAAGGTCAAGACACCACAGAAACATGAGAAAAATAATTATGAAAGAGAGACATTGAAAGTACGAAGGTCGCCTAGAGATTTAAGCAAGAAAGATGCTCAAGGAGATGCTGGCGAATGGAAACCTTGCAAGTTGACTGATAATCATTCAAACGTCATTTCTCAGTCGCCAGGAAGTGTTCGTGCATGTTTGAAAAAAGATTGCAGAGTTGTGGGAGCATTGTGTTTTGACTTTAAGAAGGAAATATCTGAAAAAATGTTTCAGTGTGATCAGATATGGGCAATATATGGTGATAGGGATAATATGCCTGACAATTATGCTCAAATTAGGAAGATTGAATTCACCCCTGATTTTAGATTGTACGTATCCCTACTTGAACCCTGCTCACCATCAAAAGGCTTAAAAAGAATATCTTGTGGTACTTTCAAAGTGAAAAAAGCTGAATCACAAATTGTCTCTCTATCTGCGTTCTCCCATCAATTGAATGTTAAACCCATGGCAAATAATATATATGAAATTTACCCTAGAAAAGGTGAGATTTGGGCTGTATACAAGGACCGGAATTATGAACTGACTTCTTCAAACCGATGCAGAGGTGAATGTCATATAGTAGAAGTATTAGCAGATGGCGACAAGAGTATACAAGTTGTTGTTCTGAGGCCTCTTAAAAGCTCTCGGCCAATTTTCAAGGTTCCTAGAAGCCAGAGATCTAAAACTGCTGTAATTGAAATATTAAGAGAAGAGGTTGGTAGATTTTCGCATCAGATTCCTGCTTTTCAGCACAGTGGGGAAGATATCGGAGGGTGTTGGGAGCTTGATCCTTCTTCAGTTCCTGGTTCTGTCATACAAATAGACTGA 3228 0.4052 MECNKDEALRAKQIAENRMQSGDFVGALKFATKAKRLFPDIQNIAQILTVCEVHCAAQNKLSGSDMDWYGILQTERFADEATIKKQYRKLALLLHPDKNNSAGAEAAFKLIGEANRMLSDQTKRSSYDIRIRVLGGNTAPKAPSHHSNGSSFGSKCDGNARNYQNTFNSHSRTWSSHQRDEQQTFWTSCQHCNTRYEYYKTIVNATLRCQQCSKSFRAHDLGHQGVSPGYTRSSFDNQKEAPKHVSPKAASKSNGGKPCGRGQEDKFVRSFPVSKTKGGVETSNRATSKAKESQSSTNVGSKRARQSASDSRDDNKAGNGVDPSGLNAGVHPRRSSRKKQHVSCTETAQDGDFESSSKRTQKYESFNATEVEKREVPASSGLFNNKNSASFTVGVSGQNGDVSNKASASLEETLLRNKIEIEQSKVQRKDVSKSDLDDRKSKADNYSPLNPDFPPDSEICCPDPDFSDFEKDRAEDCFAADQFWAIFDNNGCMPRFYALVKEVFSPFKLRIKWLEANPDDQGEFDWHCAGLPVGCGKFELGRSQITTNREMFSHQIHCKRGSARGSYLVYPKKGETWAIFRHWDMGWSSNPENHSEYQFEYVEVLSDFDENVGIKVAYLGKVKGFVSLFQQNVQNGICLFCVPPNELYRFSHRIPSYKMAGDEKEGVPRGSFELDPAGLPNSLFEVGDPGDVIKEHEMLNNGVNFPCHESSKWKVEQSVSNESIHKAKLHEINDAERASSILRRSPRSNQKGKENGQASFNQYVVREDDEDIGYRDYSQTEGITAACQTNEKVKTPQKHEKNNYERETLKVRRSPRDLSKKDAQGDAGEWKPCKLTDNHSNVISQSPGSVRACLKKDCRVVGALCFDFKKEISEKMFQCDQIWAIYGDRDNMPDNYAQIRKIEFTPDFRLYVSLLEPCSPSKGLKRISCGTFKVKKAESQIVSLSAFSHQLNVKPMANNIYEIYPRKGEIWAVYKDRNYELTSSNRCRGECHIVEVLADGDKSIQVVVLRPLKSSRPIFKVPRSQRSKTAVIEILREEVGRFSHQIPAFQHSGEDIGGCWELDPSSVPGSVIQID 1075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4766g00030 1075 Pfam DnaJ domain 67 128 IPR001623 -
Gabi4766g00030 1075 SUPERFAMILY Chaperone J-domain 63 131 IPR036869 -
Gabi4766g00030 1075 MobiDBLite consensus disorder prediction 220 371 - -
Gabi4766g00030 1075 PRINTS DnaJ domain signature 69 87 IPR001623 -
Gabi4766g00030 1075 PRINTS DnaJ domain signature 103 123 IPR001623 -
Gabi4766g00030 1075 PRINTS DnaJ domain signature 87 102 IPR001623 -
Gabi4766g00030 1075 MobiDBLite consensus disorder prediction 352 371 - -
Gabi4766g00030 1075 Gene3D DnaJ domain 64 182 IPR036869 -
Gabi4766g00030 1075 CDD DnaJ 67 120 IPR001623 -
Gabi4766g00030 1075 MobiDBLite consensus disorder prediction 426 448 - -
Gabi4766g00030 1075 MobiDBLite consensus disorder prediction 793 828 - -
Gabi4766g00030 1075 Pfam Domain of unknown function (DUF3444) 457 663 IPR024593 -
Gabi4766g00030 1075 Pfam Domain of unknown function (DUF3444) 866 1054 IPR024593 -
Gabi4766g00030 1075 MobiDBLite consensus disorder prediction 742 762 - -
Gabi4766g00030 1075 MobiDBLite consensus disorder prediction 276 305 - -
Gabi4766g00030 1075 MobiDBLite consensus disorder prediction 791 831 - -
Gabi4766g00030 1075 MobiDBLite consensus disorder prediction 737 764 - -
Gabi4766g00030 1075 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 1068 - -
Gabi4766g00030 1075 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Gabi4766g00030 1075 MobiDBLite consensus disorder prediction 426 445 - -
Gabi4766g00030 1075 SMART dnaj_3 66 123 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4766g00030 Gabi-Chr4766 321140 326475 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4766g00030 4 221 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 31.696 2.00e-26 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4766g00030 - - aprc:113861153 1522.29