Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4766g00003 ATGGTTTTGGTTTCATCACTTACCCCTCTCATGTTTACAGTGAGGAGGCGCCAACCGGAGCTGGTGACTCCTGCTATTCCTACTCCACATGAAGTTAAACTACTATCCGACATAGATGATCAAGCCGGCCTCCGTTTCCTAATTCCATTCATACACATATATAGCTACGAACCATCAATGGAAGGGAAAGACCCTGTTGATGTCATTAGAAAGGCACTAGCACAAACACTTGTGTTCTACTATCCATTTGCGGGCAGGCTTAAAGAGGGGCCTGGTCGCAAATTAATGGTGGATTGTACTGGAGAGGGAGTCTTGTTCGTTGAGGCTGATGCTGACGTGACACTTGATCAATTTGGTGAAGCTCCTCAACCTCCATTCCCATGCTTCCACCAACTCTTTTATGATGTTCAAGACTCAGAAGAAATCATTAACTATCCCCTTCTAGTCATACAGGTCACGCGCCTTAAGTGCGGTGGTTTCATCGTGGCCACGCGCATCAACCACACCATGAGCGACGGAGCTGGTATAAGACAATTCATGAACTGCATGGTTGAAATGGCAAGGGGTGCACGCAAACCTTCCATTCAACCGGTGTGGTGTAGGGAGCTCTTAATGGCTAGAGATCCACCTCGCGTTACATGCAACCATCGCGAATTCGAGCACGTGGCACCTGATACCATCAATTCATACGAGGACGATATCGTTCATCGATCTTTCTTCTTTGGACCCACCGAGATAGCTGCCATTCGTCGCTTTGTTCCACTTCACCTTCCTTACTGCACCAAATTCGAAGTTATCACGGCATGCTTCTGGTGCTGCCGTACAAAAGCATTGCAGCTAGAGCCAGAGGAGGAGGTTCGGTTTATGTGCATCATCAACGCACGTGCTAGGTTTAACCCTCCGTTACCTGAAGGTTATTACGGCAACGCTTTTGCATACCCTGCGGCGGTCACAACTTCTAGGAAACTTAGCTTTGGTTATGCACTAGAATTAATTAAGAAAGTGAAAGCTGAGGTGACAGAGGAGTATATGCATTCAGTGGCAGATCTAATGGTGAATAAGGATCGATGCTTATTTACGATCGTTAGATCGTGTATTGTGTCAGATCTGACACGTTTTGGGTTAAGAGAAGTGGATTTTGGATGGGGCAAGGCAGTGTATGGTGGAGTGGCCAAAGGTGGGGCTGGGCTCTTTCCTGGAGCAAGTTATCTTATCCCCGGTGAGAATGCAAAAGGAGAAGAGGGTATCATATTACCAATTTGCTTGCCTGCCAAAGCTATGAAGAGATTTGCCAAAGAATTGTATAACATGCTTAGGAACTAA 1323 0.4649 MVLVSSLTPLMFTVRRRQPELVTPAIPTPHEVKLLSDIDDQAGLRFLIPFIHIYSYEPSMEGKDPVDVIRKALAQTLVFYYPFAGRLKEGPGRKLMVDCTGEGVLFVEADADVTLDQFGEAPQPPFPCFHQLFYDVQDSEEIINYPLLVIQVTRLKCGGFIVATRINHTMSDGAGIRQFMNCMVEMARGARKPSIQPVWCRELLMARDPPRVTCNHREFEHVAPDTINSYEDDIVHRSFFFGPTEIAAIRRFVPLHLPYCTKFEVITACFWCCRTKALQLEPEEEVRFMCIINARARFNPPLPEGYYGNAFAYPAAVTTSRKLSFGYALELIKKVKAEVTEEYMHSVADLMVNKDRCLFTIVRSCIVSDLTRFGLREVDFGWGKAVYGGVAKGGAGLFPGASYLIPGENAKGEEGIILPICLPAKAMKRFAKELYNMLRN 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4766g00003 440 Coils Coil 435 440 - -
Gabi4766g00003 440 Gene3D - 10 216 IPR023213 -
Gabi4766g00003 440 Pfam Transferase family 14 436 - -
Gabi4766g00003 440 Gene3D - 217 434 IPR023213 -
Gabi4766g00003 440 PANTHER ACYL TRANSFERASE 4 11 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4766g00003 Gabi-Chr4766 59950 61676 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4766g00003 14 437 Monolignol Biosynthesis Gene Families AT5G48930 29.621 2.08e-45 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4766g00003 K19861 - gmx:100792864 621.313