Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4766g00002 ATGGCTTCACTACCTCCCTCTCTATTGTTTACAGTGAGGAGGCGCCAACCGGAGCTGGTAGCTCCAGCTATACTCACTCCACATGAAGTTAAATTACTATCCGACATAGATGATCAACAAGGCCTCCGTTTCCTAGCTCCAGTCATACACATATATCGTTACGAACCATCAATGGGAGGGAAAGACCCAGTTGAAGTCATTAGAAAGGCACTATCACAAACACTTGTTTTCTACTACCCATATGCAGGTAGGCTTAGGGAAGGGCCTGGCCGCAAATTGATGGTGGATTGTACTGGAGAAGGTGTCTTGTTCGTTGAGGCTGATGCTGACGTAACACTTGATCAATTTGGTGACTCTCTTCAACCTCCATTCCCATGCTTCCACCAACTCTTTTATGATGTTCCAGCCTCTGAAGAAATCATTAACTATCCCCTTCTCGTCATACAGGTCACGCGCCTTAGGTGCGGTGGTTTCATCGTGGCCTCGCGCTTTAACCACACCATGAGCGATGCAACTGGTATAAAACAATTCATGAACTGGCTTCATGAAATGGCAAGAGGTGCACGTGAACCTTCCATTCAACCGGTGTGGTGTAGGGAGCTCTTAATGGCTAGAGATCCACCGCGCATTACATGCAATCATCGTGAATACGAACAAGTGCCATCTGATACCATCAATTCGTGTGAGGACGACATCATTCATCGCTCTTTCTTCTTTGGACCCACCGAGATAGCTGCAATTCGTCGCTTCGTTCCACTTCCCCTTCGAAAATGCACCACATTTGATGTTATCACGGCATGCTTCTGGTGCTGCCGTACAAAAGCATTGCAGCTAAAGTCAGAGGAGGAGGTTCGGTTGATGTGCATGGCCAACGCACGTGCTAGGTTTAACCCTCCGTTACCTGATGGTTATTACGGCAACACTATTGCATACCCGGCAACGGTGACCACTGCAGGGAAGCTTAGCTTTGGGTATGCACTAGAATTAATAAAGAAAGTGAAAGCTGAGGTGACAGAAGAGTATATACATTCAGTGGCAGATCTAATGGTGACTAAGGGTCAATGCTTATTTACGACCGTAAGTTCATGTGTTGTGTCAGATCTGACACGTGCTCGGTTTAGAGAAATTGATTTTGGATGGGGCAAGGCAGTGTATGGTGGAGTGGCCAAAGGTGGGGCTGGGCCCTTTCCTGGAGTAACTTTTCTCGTTCTCCACAAGAACGCAAGAGGAGAAGATGGTATAATATTGCCAATTTGCTTGTCAGCAAAAGCCATGAAAAGCTTTGCTAAAGAGTTTGAGCACATGCTTGGGAACCAAGACCTAACTAGAAGGAGTGATCTTAAGATCATGTCTAGCTTATAG 1362 0.464 MASLPPSLLFTVRRRQPELVAPAILTPHEVKLLSDIDDQQGLRFLAPVIHIYRYEPSMGGKDPVEVIRKALSQTLVFYYPYAGRLREGPGRKLMVDCTGEGVLFVEADADVTLDQFGDSLQPPFPCFHQLFYDVPASEEIINYPLLVIQVTRLRCGGFIVASRFNHTMSDATGIKQFMNWLHEMARGAREPSIQPVWCRELLMARDPPRITCNHREYEQVPSDTINSCEDDIIHRSFFFGPTEIAAIRRFVPLPLRKCTTFDVITACFWCCRTKALQLKSEEEVRLMCMANARARFNPPLPDGYYGNTIAYPATVTTAGKLSFGYALELIKKVKAEVTEEYIHSVADLMVTKGQCLFTTVSSCVVSDLTRARFREIDFGWGKAVYGGVAKGGAGPFPGVTFLVLHKNARGEDGIILPICLSAKAMKSFAKEFEHMLGNQDLTRRSDLKIMSSL 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4766g00002 453 Gene3D - 215 433 IPR023213 -
Gabi4766g00002 453 PANTHER ACYL TRANSFERASE 4 10 435 - -
Gabi4766g00002 453 Gene3D - 11 214 IPR023213 -
Gabi4766g00002 453 Pfam Transferase family 12 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4766g00002 Gabi-Chr4766 52266 58102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4766g00002 12 430 Monolignol Biosynthesis Gene Families AT5G48930 29.519 7.91e-48 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4766g00002 K19861 - gmx:100792864 610.527