Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4758g00003 ATGGGAGAAACAGCAGCAGCAGCAGCAGCAACAACAACAACATCGTCAAGACTGGCGATGAGAACCGCCTCCGGCGGCGGCGGCGCAGGAGGAGGAGGAGAAATCGTGGAGGTGCAAGGAGGCCACATTGTACGGTCAACAGGGCGCAAGGACCGCCACAGCAAGGTCTGCACCGCAAAAGGTCCCCGGGACCGCCGTGTACGGCTGTCGGCACACACCGCCATCCAATTCTACGACGTGCAGGACCGCCTCGGCTACGACCGTCCCAGCAAGGCGGTGGATTGGCTCATCAAGAAGGCCAAAGCCGCCATCGACGAGCTCGCCGAGCTCCCGGCATGGATCCCCACCACCACCGCCCCACCACAACACCAATTGGTTCACCACCGTCAACCACCGGTGGACGACCCAATAACCGTCGCTTCCAGTAGCCGCATGGAAGCGGCGACAGTTGTGGTGGGTGGAAGAATCTCAGAACAACAATTTCATACGCAACAATTGGAAGATGAAAACAACAAATATAACAGTGGTTCTGGTTTTCTTCAGTTGGACACTGACATTGCTGATACTATTAAGTCCTTCTTTCCCATGGAGGCCGCAACGGCGTCGTTTCAGAATTACCCTCCACCTCAGGATTTGTTGTCCCGAACGACGTCGCAGGATCTGCGGCTTTCATTGCAGTCCTTTCAGGACCCCATTCTGCTTCATCACCACCAGGCTCAGACCCACCACCACCACCACCACGAGCAAGTGCTCTTCGCCGGAAACGCCGCACTCGGCTTTGACGGCGGATCCTTCGGTGCCGGTTGGTCTGAGCAGCAGCACCACCACCACATGGAGGAACACGAGCAAGGACGACTACATAGATTGGTGGCTTGGAATGCTGCTGCTTCTGCAGATCCTGGTAACAGTGGCCATGGCGGTGAGTTTATCTTTAACTCACCGTCGCCGGCACCGGCGTCGGTGTTCGGCCATGGCCAGTATTTTTCTCAGAGGGGACCCCTTCAGTCCAGTAACACCCCTTCGGTTCGTGCTTGGATAGACCCTTCGATCGCCGAGGCGACGGTAGACCACAACCAACATCACTACCTCTCGCCGGCGATGTATCAGTCTTTTTCCGGCGTCGGTTTCGCCGGCTCCGGTGGCTTCTCCGGGTTCCGCATACCAGCACGAATTCAGGGTGAAGAGGAACACGATGGCGTATCTGACAAGCCGTCCTCTGCTTCCTCTGATTCTCGCCATTGA 1242 0.5725 MGETAAAAAATTTTSSRLAMRTASGGGGAGGGGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAIDELAELPAWIPTTTAPPQHQLVHHRQPPVDDPITVASSSRMEAATVVVGGRISEQQFHTQQLEDENNKYNSGSGFLQLDTDIADTIKSFFPMEAATASFQNYPPPQDLLSRTTSQDLRLSLQSFQDPILLHHHQAQTHHHHHHEQVLFAGNAALGFDGGSFGAGWSEQQHHHHMEEHEQGRLHRLVAWNAAASADPGNSGHGGEFIFNSPSPAPASVFGHGQYFSQRGPLQSSNTPSVRAWIDPSIAEATVDHNQHHYLSPAMYQSFSGVGFAGSGGFSGFRIPARIQGEEEHDGVSDKPSSASSDSRH 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4758g00003 413 MobiDBLite consensus disorder prediction 390 413 - -
Gabi4758g00003 413 MobiDBLite consensus disorder prediction 7 21 - -
Gabi4758g00003 413 Pfam TCP family transcription factor 48 125 IPR017887 -
Gabi4758g00003 413 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 9 336 IPR005333 GO:0003700
Gabi4758g00003 413 MobiDBLite consensus disorder prediction 389 413 - -
Gabi4758g00003 413 ProSiteProfiles TCP domain profile. 49 107 IPR017887 -
Gabi4758g00003 413 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4758g00003 Gabi-Chr4758 38586 40299 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4758g00003 30 413 TCP Transcription Factor Family AT1G53230 49.500 4.75e-99 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gabi4758g00003 TCP 6.5e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4758g00003 - - mtr:25502512 441.039