Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4743g00004 ATGTCGGATTCAGAGCAATGCCCACCTTTTAACTCACCCAGATTGGTTCTCAAGAAGGTTTTAGCCCAATCTCAACAAGAAGGTGATGGAGCACTTGTCACGAGAGGCATTGGAAGTATTGAGTTGCAGAGCTTGGATCCTTTTCTGTTGTTGGATCACTTCTCAGTATCTCCGCCTGCAGGATTTCCTGACCATCCACACAGAGGTTTTGAAACTGTCACCTACATGCTACAGGGAGGCATAACTCATCAAGATTTTGCTGGGCATAGGGGTACAATAAGAACTGGTGATGTTCAGTGGATGACGGCAGGCAGAGGAATAATTCACTCTGAAATGCCTGCAGGAGAAGGAACCCACAAGGGAATACAACTATGGATCAATTTACCTGCCACACACAAAATGATTGAACCAAACTATCAAGAACTTGCAAGCGAAGACATAGCATCAGCAGAGAAAGATGGTGTTCGAGTGAGGGTTATAGCAGGAGAAGCAATGGGAGTGCATTCACGGGTTTACACTCGAACACCAACCATGTTCCTTGATTTTACTCTTGAGCCCGGAGCTGAATTGCATCAAGGTATTCCAGAGACATGGAATTCCTTTGTTTATGTGATTGATGGGGAAGGAGTTTTTGGGTTCCCAAGCTGTTCACCAATTATGCGTCACCATGTTCTGGTTTTGAGTCTGGGCGATGGTCTTAGCGTTTGGAATAAGTCTGAACAAGCACTGAGGTTTGTGCTGATCGGAGGACAGCCGCTGAATGAGCCAGTGGCTCGGCATGGACCATTCGTGATGAATACTCAATCTGAAATTAAAAAAACTATTCAAGACTATCACTTCCGCAAGAACGGGTTTGAGATGGGAAAATATTGGACATCTCAATACTAA 888 0.4482 MSDSEQCPPFNSPRLVLKKVLAQSQQEGDGALVTRGIGSIELQSLDPFLLLDHFSVSPPAGFPDHPHRGFETVTYMLQGGITHQDFAGHRGTIRTGDVQWMTAGRGIIHSEMPAGEGTHKGIQLWINLPATHKMIEPNYQELASEDIASAEKDGVRVRVIAGEAMGVHSRVYTRTPTMFLDFTLEPGAELHQGIPETWNSFVYVIDGEGVFGFPSCSPIMRHHVLVLSLGDGLSVWNKSEQALRFVLIGGQPLNEPVARHGPFVMNTQSEIKKTIQDYHFRKNGFEMGKYWTSQY 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4743g00004 295 Pfam Pirin C-terminal cupin domain 179 283 IPR008778 -
Gabi4743g00004 295 CDD cupin_pirin_C 176 252 - -
Gabi4743g00004 295 FunFam pirin 27 163 - -
Gabi4743g00004 295 CDD cupin_pirin_N 31 129 - -
Gabi4743g00004 295 Pfam Pirin 38 126 IPR003829 -
Gabi4743g00004 295 Gene3D Jelly Rolls 27 279 IPR014710 -
Gabi4743g00004 295 SUPERFAMILY RmlC-like cupins 14 293 IPR011051 -
Gabi4743g00004 295 PIRSF Pirin 12 292 IPR012093 -
Gabi4743g00004 295 Gene3D Jelly Rolls 148 253 IPR014710 -
Gabi4743g00004 295 PANTHER PIRIN-RELATED 1 294 IPR012093 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4743g00004 Gabi-Chr4743 27303 29046 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4743g00004 13 289 Calmodulin-binding Proteins AT3G59220 62.366 2.01e-126 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4743g00004 K06911 - zju:125423505 463.766