Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi4741g00004 | ATGATGTTATCAGCTTCGCCAAATTCCTTAGCGAGGAGTTCGCTGGAAGAGATGCTTGATTCTCTTCGCCGGAAAGATGAGGAGGAGAAGCCGAAGGACTTGCCTCCGGCATTGCCGTCTCGGCCGACGTCGAGAGCTCGGCTTCCGTCAGCAAGAAGGTCATTGCCTAATAGCTTCAAGATTGTTGATGGTGATCCTTTCCTGAATGGAGAAGAGACCAAGAGGAAAGACAAGGAAATGGGGCACAAGAGGAAAGGTAGTTTTGGGGGCAAGAAGATTAAGTTGGATGTTGAATCTCCTTACATAGTCAAATCAGAAGAGAAAATGAGTGAACAATTATCATCACAAAGTCCAGTTTCAACATCTAATGATGATACTACTGCTTCTGTTGCTCCTCCATCAGGGGAATTGGAGGATGACAACATTGGTTATTTCATCAAAAAGAAACTTCATGTTTGGTGTAGGCAACCAAGAGGGAAGTGGGGACTGGGAAAGATACAGTCAACTTCAGGAGAGGAAGCATCTGTTTCACTTTCAAATGGAAATGTTATGAAAGTGGCCAGATCAGAGCTCCTACCAGCTAATCCTGATATTTTGGAGGGTGTGGATGATCTTATACAGCTCAGTTATTTAAATGAGCCCTCAGTTCTTCACAATCTTCATTTTAGATATTCTCAGGATACGATTTATAGTAAAGCAGGGCCAGTTTTAATTGCACTCAATCCTTTCAAAGATGTCCAGATTTATGGAAATGATTACCTCTCAGCTTATAAGCAGAAATCTATTGACAGTCCTCATGTTTATGCTATGGCAGATGCAGCTTATAATGAGATGATAAGAGATGAAGTAAATCAGTCTATTATCATAAGTGGCGAGAGTGGATCTGGGAAGACAGAAACAGCAAAAATTGCTATGCAATACTTAGCTGCTCTTGGTGGGGGTAGTTGTGGGATAGAAAACGAAGTTCTTCAGACAAATTTTATACTAGAAGCTTTTGGGAATGCAAAAACATCTAGGAATGACAACTCTAGCAGATTTGGGAAGTTGATTGAAATTCATTTCAGCACAATAGGGAAAATTTGTGGGGCTAAAATTCAAACCTTTCTGTTAGAAAAGTCAAGAGTTGTTCAACTGGCCAGTGGCGAGAGATCTTATCATATATTTTATCAACTTTGTGCTGGAGCTTCACCTGATCTTAAAGAGAGACTGAATCTTAGAGTGGCCAGTGAATATAAATATCTTAATCAGAGTGACTGCATGACAATTGATGGTGTTGAAGATGCTAAAAAGTTTCATAGGCTGATGAAAGCATTAGATGTTGTTCAAATGAGCAAAGAGGATCAAGAGCTGGTCTTTAAGATGCTTGCTGCAATATTATGGCTCGGAAATATATCATTCCAAGTCACTGACAATGAAAATCACATTGAAGTGATGAACGATGAAGCTGTAACCAGAGCTGTTTTGCTGATGGGTTGCAGTTCCCAGGAGTTAATGGCAGCATTATCTACCCATAAAATCCAAGCTGGCAAGGATACTATTGCCAAAACGTTGACATTGCAGCAGGCAATTGATACAAGAGATGCATTAGCAAAATTTATCTATGCAAGCTTGTTTGACTGGCTTGTAGAACAAGTTAATAAGTCACTTGAAGTAGGTAAACGACGTACAGGGAGATCCATAAGTATCGTTGATATTTATGGGTTTGAGTCATTCCAGAAAAACAGCTTTGAACAGTTGTGTATAAATTATGCCAATGAGAGGCTTCAACAACATTTCAATCGGCATCTGTTTAAACTTGAGCAGGAGGAGTACGAATTAGATGGTGTTGATTGGACCAAAGTAGATTTTGAGGACAATCAAGAGTGTTTGGATCTCTTTGAGAAGAAGCCTCTGGGGCTACTCTCTTTGTTGGATGAGGAATCACATTTCCCCCGGGCCACTGATCTAACATTTGCCAACAAAATTAGGCAGCACCTTTACGCTAGTCCTTGCTTTAAAGGGGACAGAGGCAAGGCTTTCAGTGTTCATCATTATGCAGGGGAGGTTTTGTATGATACAAACGGCTTTCTAGAAAAGAACAGAGATGCACTGCCATCTGATTCCATTCAACTACTGTCATCATGTAGTTGTGAACTACTGCAGTTGTTCTCCAAAATGATTAACCAGTCTCAGAAGCAATCAAATTCCCTCCACATAGGTACTCATGACTCACAAAAGCAGAGTGTTGGCACAAAGTTCAAGGGTCAATTGTTCAAGTTGATGCATCAGTTGGAGAGCACCACACCTCACTTTATTCGCTGTATAAAGCCAAATACTAAGCAACTTCCTGGAATATTTGACGAAGATCTTGTCCTACAACAGCTTATGTGTTGTGGAGTTTTGGAGGTTGTAAGGATTTCAAGGGCTGGATATCCTACTCGAATGACGCATCAAGAGTTTGCTGGAAGGTATGGGTTTTTGCTTGATGAGGCCAACGCAACTCAGGATCCATTGAGCATCTCAGTCGCTGTTCTGCAACAATTTAATATACCACCTGAAATGTACCAAGTTGGCTACACCAAACTGTATCTTCGAACTGGGCAGATTGGTGCATTGGAGGATAGGAGGAAACTGATTTTGAAGGGAATACTTGGGGTTCAAAAATCCTTTCGTGGTCATCAAGCTCGTAGTTATTACCATGAACTAAAGAATGGAGCGACAACTTTACAATCATTTGTTCGTGGAGAAATTGCGAGAAGGAAATATGGTATTATGATGAAGTCTTCTATAACTATTTCTACTGAAAAAATTGAGGTGTTACAGGCAGTCATAATTCTACAATCTGTGATTCGTGGGTGGCTGGTTCGAAAGCGTGCTAGTGGCTTGAGTAAGTTAAAGAAATATCCTGAAAATGCAAAAACTAAGCGAAAGTCACGTGAGAAGATGTCAGAAGTGAAGGATGTGTCCAAAGAGCGGGTCCAGAATCTGCCTTCAGCTTTAGCAGAACTCCAACGGCGGGTTGTCAAGGCTGAATCAACTATAGAGCAAAAGGAAGAGGAAAATGCTGAATTGAGGGAACAACTAAAACAATTTGAGAGAAGGTGGATTGAATATGAGACAAAGATGAAATCAATGGAGGATATGTGGCAAAAGCAGATGGCATCTTTGCAAATGAGTCTTGCTGCTGCTAGAAAGAGCCTTGCTGAGAATGGCAATGGTCAACCAGTAAGAAATGATGTTATGTCACCTTTCGGCTATGATTCCGAAGATGCTACTTCCATGGGATCTCGAACACCTCGAACGCCGGGTGCGAGCACACCTTTGAAGTATTCTACTAGTCTTTCTGAGGCTGGAGCAGGGAGAGATGCTAATGGAACTTTGAGTACAGTTAACAATCTCATGAAGGAATTTGAGCAGCGCAGACAAACCTTTGATGGGGATGCCAGAGCTCTACTTGAGGTTAAAACAGGACAATCTGTGAACACGAATTCTGTTGAAGAACTTAGGAAACTCAAACATAGGTTTCAGGGGTGGAAGAAAGAATACAAGGTTAGATTACGTGAGACAAAAGCAAGACTTCAAAAACTCGGTAATTCTGAAGTGGAAAAAGGTCGGCGAAAATGGTGGGGAAAATTCAGTTCTAGAGCACTATAA | 3633 | 0.4112 | MMLSASPNSLARSSLEEMLDSLRRKDEEEKPKDLPPALPSRPTSRARLPSARRSLPNSFKIVDGDPFLNGEETKRKDKEMGHKRKGSFGGKKIKLDVESPYIVKSEEKMSEQLSSQSPVSTSNDDTTASVAPPSGELEDDNIGYFIKKKLHVWCRQPRGKWGLGKIQSTSGEEASVSLSNGNVMKVARSELLPANPDILEGVDDLIQLSYLNEPSVLHNLHFRYSQDTIYSKAGPVLIALNPFKDVQIYGNDYLSAYKQKSIDSPHVYAMADAAYNEMIRDEVNQSIIISGESGSGKTETAKIAMQYLAALGGGSCGIENEVLQTNFILEAFGNAKTSRNDNSSRFGKLIEIHFSTIGKICGAKIQTFLLEKSRVVQLASGERSYHIFYQLCAGASPDLKERLNLRVASEYKYLNQSDCMTIDGVEDAKKFHRLMKALDVVQMSKEDQELVFKMLAAILWLGNISFQVTDNENHIEVMNDEAVTRAVLLMGCSSQELMAALSTHKIQAGKDTIAKTLTLQQAIDTRDALAKFIYASLFDWLVEQVNKSLEVGKRRTGRSISIVDIYGFESFQKNSFEQLCINYANERLQQHFNRHLFKLEQEEYELDGVDWTKVDFEDNQECLDLFEKKPLGLLSLLDEESHFPRATDLTFANKIRQHLYASPCFKGDRGKAFSVHHYAGEVLYDTNGFLEKNRDALPSDSIQLLSSCSCELLQLFSKMINQSQKQSNSLHIGTHDSQKQSVGTKFKGQLFKLMHQLESTTPHFIRCIKPNTKQLPGIFDEDLVLQQLMCCGVLEVVRISRAGYPTRMTHQEFAGRYGFLLDEANATQDPLSISVAVLQQFNIPPEMYQVGYTKLYLRTGQIGALEDRRKLILKGILGVQKSFRGHQARSYYHELKNGATTLQSFVRGEIARRKYGIMMKSSITISTEKIEVLQAVIILQSVIRGWLVRKRASGLSKLKKYPENAKTKRKSREKMSEVKDVSKERVQNLPSALAELQRRVVKAESTIEQKEEENAELREQLKQFERRWIEYETKMKSMEDMWQKQMASLQMSLAAARKSLAENGNGQPVRNDVMSPFGYDSEDATSMGSRTPRTPGASTPLKYSTSLSEAGAGRDANGTLSTVNNLMKEFEQRRQTFDGDARALLEVKTGQSVNTNSVEELRKLKHRFQGWKKEYKVRLRETKARLQKLGNSEVEKGRRKWWGKFSSRAL | 1210 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi4741g00004 | 1210 | ProSiteProfiles | IQ motif profile. | 895 | 924 | IPR000048 | GO:0005515 | |
Gabi4741g00004 | 1210 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
Gabi4741g00004 | 1210 | Gene3D | - | 876 | 922 | - | - | |
Gabi4741g00004 | 1210 | SMART | MYSc_2a | 194 | 871 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Gabi4741g00004 | 1210 | PRINTS | Myosin heavy chain signature | 559 | 587 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Gabi4741g00004 | 1210 | PRINTS | Myosin heavy chain signature | 230 | 249 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Gabi4741g00004 | 1210 | PRINTS | Myosin heavy chain signature | 612 | 640 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Gabi4741g00004 | 1210 | PRINTS | Myosin heavy chain signature | 284 | 309 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Gabi4741g00004 | 1210 | PRINTS | Myosin heavy chain signature | 327 | 354 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Gabi4741g00004 | 1210 | Gene3D | - | 571 | 760 | - | - | |
Gabi4741g00004 | 1210 | FunFam | Myosin heavy chain | 383 | 439 | - | - | |
Gabi4741g00004 | 1210 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 147 | 196 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
Gabi4741g00004 | 1210 | MobiDBLite | consensus disorder prediction | 17 | 35 | - | - | |
Gabi4741g00004 | 1210 | MobiDBLite | consensus disorder prediction | 108 | 130 | - | - | |
Gabi4741g00004 | 1210 | FunFam | Unconventional myosin-XIX | 571 | 760 | - | - | |
Gabi4741g00004 | 1210 | Gene3D | Kinesin motor domain | 199 | 803 | IPR036961 | - | |
Gabi4741g00004 | 1210 | ProSiteProfiles | Myosin motor domain profile. | 200 | 870 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Gabi4741g00004 | 1210 | Coils | Coil | 1172 | 1192 | - | - | |
Gabi4741g00004 | 1210 | CDD | MYSc_Myo8 | 214 | 858 | IPR036022 | - | |
Gabi4741g00004 | 1210 | MobiDBLite | consensus disorder prediction | 1079 | 1118 | - | - | |
Gabi4741g00004 | 1210 | FunFam | Myosin IE heavy chain | 440 | 548 | - | - | |
Gabi4741g00004 | 1210 | SMART | iq_5 | 894 | 916 | IPR000048 | GO:0005515 | |
Gabi4741g00004 | 1210 | SMART | iq_5 | 871 | 893 | IPR000048 | GO:0005515 | |
Gabi4741g00004 | 1210 | SMART | iq_5 | 931 | 953 | IPR000048 | GO:0005515 | |
Gabi4741g00004 | 1210 | ProSiteProfiles | IQ motif profile. | 874 | 901 | IPR000048 | GO:0005515 | |
Gabi4741g00004 | 1210 | Coils | Coil | 993 | 1034 | - | - | |
Gabi4741g00004 | 1210 | MobiDBLite | consensus disorder prediction | 67 | 89 | - | - | |
Gabi4741g00004 | 1210 | ProSiteProfiles | IQ motif profile. | 934 | 960 | IPR000048 | GO:0005515 | |
Gabi4741g00004 | 1210 | Pfam | IQ calmodulin-binding motif | 876 | 893 | IPR000048 | GO:0005515 | |
Gabi4741g00004 | 1210 | Pfam | IQ calmodulin-binding motif | 898 | 915 | IPR000048 | GO:0005515 | |
Gabi4741g00004 | 1210 | Pfam | IQ calmodulin-binding motif | 934 | 951 | IPR000048 | GO:0005515 | |
Gabi4741g00004 | 1210 | Gene3D | - | 383 | 439 | - | - | |
Gabi4741g00004 | 1210 | PANTHER | MYOSIN | 193 | 1207 | - | - | |
Gabi4741g00004 | 1210 | MobiDBLite | consensus disorder prediction | 106 | 134 | - | - | |
Gabi4741g00004 | 1210 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 440 | 548 | - | - | |
Gabi4741g00004 | 1210 | MobiDBLite | consensus disorder prediction | 1082 | 1118 | - | - | |
Gabi4741g00004 | 1210 | Gene3D | - | 804 | 871 | - | - | |
Gabi4741g00004 | 1210 | MobiDBLite | consensus disorder prediction | 1 | 89 | - | - | |
Gabi4741g00004 | 1210 | Pfam | Myosin head (motor domain) | 202 | 858 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Gabi4741g00004 | 1210 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 176 | 921 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi4741g00004 | Gabi-Chr4741 | 20927 | 34921 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi4741g00004 | 1 | 1204 | Myosins gene family | AT5G54280 | 63.974 | 0.0 | 1593 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi4741g00004 | K10357 | - | gmx:100819335 | 1970.67 |