Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4741g00004 ATGATGTTATCAGCTTCGCCAAATTCCTTAGCGAGGAGTTCGCTGGAAGAGATGCTTGATTCTCTTCGCCGGAAAGATGAGGAGGAGAAGCCGAAGGACTTGCCTCCGGCATTGCCGTCTCGGCCGACGTCGAGAGCTCGGCTTCCGTCAGCAAGAAGGTCATTGCCTAATAGCTTCAAGATTGTTGATGGTGATCCTTTCCTGAATGGAGAAGAGACCAAGAGGAAAGACAAGGAAATGGGGCACAAGAGGAAAGGTAGTTTTGGGGGCAAGAAGATTAAGTTGGATGTTGAATCTCCTTACATAGTCAAATCAGAAGAGAAAATGAGTGAACAATTATCATCACAAAGTCCAGTTTCAACATCTAATGATGATACTACTGCTTCTGTTGCTCCTCCATCAGGGGAATTGGAGGATGACAACATTGGTTATTTCATCAAAAAGAAACTTCATGTTTGGTGTAGGCAACCAAGAGGGAAGTGGGGACTGGGAAAGATACAGTCAACTTCAGGAGAGGAAGCATCTGTTTCACTTTCAAATGGAAATGTTATGAAAGTGGCCAGATCAGAGCTCCTACCAGCTAATCCTGATATTTTGGAGGGTGTGGATGATCTTATACAGCTCAGTTATTTAAATGAGCCCTCAGTTCTTCACAATCTTCATTTTAGATATTCTCAGGATACGATTTATAGTAAAGCAGGGCCAGTTTTAATTGCACTCAATCCTTTCAAAGATGTCCAGATTTATGGAAATGATTACCTCTCAGCTTATAAGCAGAAATCTATTGACAGTCCTCATGTTTATGCTATGGCAGATGCAGCTTATAATGAGATGATAAGAGATGAAGTAAATCAGTCTATTATCATAAGTGGCGAGAGTGGATCTGGGAAGACAGAAACAGCAAAAATTGCTATGCAATACTTAGCTGCTCTTGGTGGGGGTAGTTGTGGGATAGAAAACGAAGTTCTTCAGACAAATTTTATACTAGAAGCTTTTGGGAATGCAAAAACATCTAGGAATGACAACTCTAGCAGATTTGGGAAGTTGATTGAAATTCATTTCAGCACAATAGGGAAAATTTGTGGGGCTAAAATTCAAACCTTTCTGTTAGAAAAGTCAAGAGTTGTTCAACTGGCCAGTGGCGAGAGATCTTATCATATATTTTATCAACTTTGTGCTGGAGCTTCACCTGATCTTAAAGAGAGACTGAATCTTAGAGTGGCCAGTGAATATAAATATCTTAATCAGAGTGACTGCATGACAATTGATGGTGTTGAAGATGCTAAAAAGTTTCATAGGCTGATGAAAGCATTAGATGTTGTTCAAATGAGCAAAGAGGATCAAGAGCTGGTCTTTAAGATGCTTGCTGCAATATTATGGCTCGGAAATATATCATTCCAAGTCACTGACAATGAAAATCACATTGAAGTGATGAACGATGAAGCTGTAACCAGAGCTGTTTTGCTGATGGGTTGCAGTTCCCAGGAGTTAATGGCAGCATTATCTACCCATAAAATCCAAGCTGGCAAGGATACTATTGCCAAAACGTTGACATTGCAGCAGGCAATTGATACAAGAGATGCATTAGCAAAATTTATCTATGCAAGCTTGTTTGACTGGCTTGTAGAACAAGTTAATAAGTCACTTGAAGTAGGTAAACGACGTACAGGGAGATCCATAAGTATCGTTGATATTTATGGGTTTGAGTCATTCCAGAAAAACAGCTTTGAACAGTTGTGTATAAATTATGCCAATGAGAGGCTTCAACAACATTTCAATCGGCATCTGTTTAAACTTGAGCAGGAGGAGTACGAATTAGATGGTGTTGATTGGACCAAAGTAGATTTTGAGGACAATCAAGAGTGTTTGGATCTCTTTGAGAAGAAGCCTCTGGGGCTACTCTCTTTGTTGGATGAGGAATCACATTTCCCCCGGGCCACTGATCTAACATTTGCCAACAAAATTAGGCAGCACCTTTACGCTAGTCCTTGCTTTAAAGGGGACAGAGGCAAGGCTTTCAGTGTTCATCATTATGCAGGGGAGGTTTTGTATGATACAAACGGCTTTCTAGAAAAGAACAGAGATGCACTGCCATCTGATTCCATTCAACTACTGTCATCATGTAGTTGTGAACTACTGCAGTTGTTCTCCAAAATGATTAACCAGTCTCAGAAGCAATCAAATTCCCTCCACATAGGTACTCATGACTCACAAAAGCAGAGTGTTGGCACAAAGTTCAAGGGTCAATTGTTCAAGTTGATGCATCAGTTGGAGAGCACCACACCTCACTTTATTCGCTGTATAAAGCCAAATACTAAGCAACTTCCTGGAATATTTGACGAAGATCTTGTCCTACAACAGCTTATGTGTTGTGGAGTTTTGGAGGTTGTAAGGATTTCAAGGGCTGGATATCCTACTCGAATGACGCATCAAGAGTTTGCTGGAAGGTATGGGTTTTTGCTTGATGAGGCCAACGCAACTCAGGATCCATTGAGCATCTCAGTCGCTGTTCTGCAACAATTTAATATACCACCTGAAATGTACCAAGTTGGCTACACCAAACTGTATCTTCGAACTGGGCAGATTGGTGCATTGGAGGATAGGAGGAAACTGATTTTGAAGGGAATACTTGGGGTTCAAAAATCCTTTCGTGGTCATCAAGCTCGTAGTTATTACCATGAACTAAAGAATGGAGCGACAACTTTACAATCATTTGTTCGTGGAGAAATTGCGAGAAGGAAATATGGTATTATGATGAAGTCTTCTATAACTATTTCTACTGAAAAAATTGAGGTGTTACAGGCAGTCATAATTCTACAATCTGTGATTCGTGGGTGGCTGGTTCGAAAGCGTGCTAGTGGCTTGAGTAAGTTAAAGAAATATCCTGAAAATGCAAAAACTAAGCGAAAGTCACGTGAGAAGATGTCAGAAGTGAAGGATGTGTCCAAAGAGCGGGTCCAGAATCTGCCTTCAGCTTTAGCAGAACTCCAACGGCGGGTTGTCAAGGCTGAATCAACTATAGAGCAAAAGGAAGAGGAAAATGCTGAATTGAGGGAACAACTAAAACAATTTGAGAGAAGGTGGATTGAATATGAGACAAAGATGAAATCAATGGAGGATATGTGGCAAAAGCAGATGGCATCTTTGCAAATGAGTCTTGCTGCTGCTAGAAAGAGCCTTGCTGAGAATGGCAATGGTCAACCAGTAAGAAATGATGTTATGTCACCTTTCGGCTATGATTCCGAAGATGCTACTTCCATGGGATCTCGAACACCTCGAACGCCGGGTGCGAGCACACCTTTGAAGTATTCTACTAGTCTTTCTGAGGCTGGAGCAGGGAGAGATGCTAATGGAACTTTGAGTACAGTTAACAATCTCATGAAGGAATTTGAGCAGCGCAGACAAACCTTTGATGGGGATGCCAGAGCTCTACTTGAGGTTAAAACAGGACAATCTGTGAACACGAATTCTGTTGAAGAACTTAGGAAACTCAAACATAGGTTTCAGGGGTGGAAGAAAGAATACAAGGTTAGATTACGTGAGACAAAAGCAAGACTTCAAAAACTCGGTAATTCTGAAGTGGAAAAAGGTCGGCGAAAATGGTGGGGAAAATTCAGTTCTAGAGCACTATAA 3633 0.4112 MMLSASPNSLARSSLEEMLDSLRRKDEEEKPKDLPPALPSRPTSRARLPSARRSLPNSFKIVDGDPFLNGEETKRKDKEMGHKRKGSFGGKKIKLDVESPYIVKSEEKMSEQLSSQSPVSTSNDDTTASVAPPSGELEDDNIGYFIKKKLHVWCRQPRGKWGLGKIQSTSGEEASVSLSNGNVMKVARSELLPANPDILEGVDDLIQLSYLNEPSVLHNLHFRYSQDTIYSKAGPVLIALNPFKDVQIYGNDYLSAYKQKSIDSPHVYAMADAAYNEMIRDEVNQSIIISGESGSGKTETAKIAMQYLAALGGGSCGIENEVLQTNFILEAFGNAKTSRNDNSSRFGKLIEIHFSTIGKICGAKIQTFLLEKSRVVQLASGERSYHIFYQLCAGASPDLKERLNLRVASEYKYLNQSDCMTIDGVEDAKKFHRLMKALDVVQMSKEDQELVFKMLAAILWLGNISFQVTDNENHIEVMNDEAVTRAVLLMGCSSQELMAALSTHKIQAGKDTIAKTLTLQQAIDTRDALAKFIYASLFDWLVEQVNKSLEVGKRRTGRSISIVDIYGFESFQKNSFEQLCINYANERLQQHFNRHLFKLEQEEYELDGVDWTKVDFEDNQECLDLFEKKPLGLLSLLDEESHFPRATDLTFANKIRQHLYASPCFKGDRGKAFSVHHYAGEVLYDTNGFLEKNRDALPSDSIQLLSSCSCELLQLFSKMINQSQKQSNSLHIGTHDSQKQSVGTKFKGQLFKLMHQLESTTPHFIRCIKPNTKQLPGIFDEDLVLQQLMCCGVLEVVRISRAGYPTRMTHQEFAGRYGFLLDEANATQDPLSISVAVLQQFNIPPEMYQVGYTKLYLRTGQIGALEDRRKLILKGILGVQKSFRGHQARSYYHELKNGATTLQSFVRGEIARRKYGIMMKSSITISTEKIEVLQAVIILQSVIRGWLVRKRASGLSKLKKYPENAKTKRKSREKMSEVKDVSKERVQNLPSALAELQRRVVKAESTIEQKEEENAELREQLKQFERRWIEYETKMKSMEDMWQKQMASLQMSLAAARKSLAENGNGQPVRNDVMSPFGYDSEDATSMGSRTPRTPGASTPLKYSTSLSEAGAGRDANGTLSTVNNLMKEFEQRRQTFDGDARALLEVKTGQSVNTNSVEELRKLKHRFQGWKKEYKVRLRETKARLQKLGNSEVEKGRRKWWGKFSSRAL 1210
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gabi4741g00004 1210 ProSiteProfiles IQ motif profile. 895 924 IPR000048 GO:0005515
Gabi4741g00004 1210 MobiDBLite consensus disorder prediction 1 15 - -
Gabi4741g00004 1210 Gene3D - 876 922 - -
Gabi4741g00004 1210 SMART MYSc_2a 194 871 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gabi4741g00004 1210 PRINTS Myosin heavy chain signature 559 587 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gabi4741g00004 1210 PRINTS Myosin heavy chain signature 230 249 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gabi4741g00004 1210 PRINTS Myosin heavy chain signature 612 640 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gabi4741g00004 1210 PRINTS Myosin heavy chain signature 284 309 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gabi4741g00004 1210 PRINTS Myosin heavy chain signature 327 354 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gabi4741g00004 1210 Gene3D - 571 760 - -
Gabi4741g00004 1210 FunFam Myosin heavy chain 383 439 - -
Gabi4741g00004 1210 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 147 196 IPR004009 GO:0003774|GO:0005524|GO:0016459
Gabi4741g00004 1210 MobiDBLite consensus disorder prediction 17 35 - -
Gabi4741g00004 1210 MobiDBLite consensus disorder prediction 108 130 - -
Gabi4741g00004 1210 FunFam Unconventional myosin-XIX 571 760 - -
Gabi4741g00004 1210 Gene3D Kinesin motor domain 199 803 IPR036961 -
Gabi4741g00004 1210 ProSiteProfiles Myosin motor domain profile. 200 870 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gabi4741g00004 1210 Coils Coil 1172 1192 - -
Gabi4741g00004 1210 CDD MYSc_Myo8 214 858 IPR036022 -
Gabi4741g00004 1210 MobiDBLite consensus disorder prediction 1079 1118 - -
Gabi4741g00004 1210 FunFam Myosin IE heavy chain 440 548 - -
Gabi4741g00004 1210 SMART iq_5 894 916 IPR000048 GO:0005515
Gabi4741g00004 1210 SMART iq_5 871 893 IPR000048 GO:0005515
Gabi4741g00004 1210 SMART iq_5 931 953 IPR000048 GO:0005515
Gabi4741g00004 1210 ProSiteProfiles IQ motif profile. 874 901 IPR000048 GO:0005515
Gabi4741g00004 1210 Coils Coil 993 1034 - -
Gabi4741g00004 1210 MobiDBLite consensus disorder prediction 67 89 - -
Gabi4741g00004 1210 ProSiteProfiles IQ motif profile. 934 960 IPR000048 GO:0005515
Gabi4741g00004 1210 Pfam IQ calmodulin-binding motif 876 893 IPR000048 GO:0005515
Gabi4741g00004 1210 Pfam IQ calmodulin-binding motif 898 915 IPR000048 GO:0005515
Gabi4741g00004 1210 Pfam IQ calmodulin-binding motif 934 951 IPR000048 GO:0005515
Gabi4741g00004 1210 Gene3D - 383 439 - -
Gabi4741g00004 1210 PANTHER MYOSIN 193 1207 - -
Gabi4741g00004 1210 MobiDBLite consensus disorder prediction 106 134 - -
Gabi4741g00004 1210 Gene3D Myosin VI head, motor domain, U50 subdomain 440 548 - -
Gabi4741g00004 1210 MobiDBLite consensus disorder prediction 1082 1118 - -
Gabi4741g00004 1210 Gene3D - 804 871 - -
Gabi4741g00004 1210 MobiDBLite consensus disorder prediction 1 89 - -
Gabi4741g00004 1210 Pfam Myosin head (motor domain) 202 858 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gabi4741g00004 1210 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 176 921 IPR027417 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gabi4741g00004 Gabi-Chr4741 20927 34921 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4741g00004 1 1204 Myosins gene family AT5G54280 63.974 0.0 1593
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4741g00004 K10357 - gmx:100819335 1970.67