Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4729g00001 ATGATATCCAGCTATGATAAGATTTTCATTTGGTTTCCTTTTTATGCTTTTGTTGTTCCATCATTTTCTTCTGCTGCTGAACGAGACTATTATCGAGTTCTTGGTGTTCCTGAAACTGCCAGTCAGGATGAGATAAAGAAGGCATTTCACTTGCTTGCTAAAAAGTACCATCCAGATGCAAGTAAGAATAATCCATCTTCGAAGAGGAAATTTCTTGATATAAGAGAAGAATATGAGACATTGAGAGACTCTAAAAAAAGGGCAGAGTATGACAAGATGCGTAATCGTGGTTCAGAGAACATTGAATACGGTGATGATGATGCAGAAAGGTTTAGAAATGCTTATCGTTCTCATTTTTCTGATTCATTTCATAAAGTGTTCTCTGAGATATTTGAAGAAGCAACTCAATTCTCGTCAAATATAGAGGTGGAGTTGACTCTTACTTTCTCAGAAGCTGCAAGAGGATGCACCAAACATGTGTCGTTTGATGCGTTAATTCCCTGTGATTATTGCAATGGGCGGGGCTATCCGCAAGATGCCAACCCTAAAGTTTGTCCAACATGCAGGGGCTCAGGTCGAGTTACAATCCCTCCATTTACTTCAACATGCATTACTTGTAAAGGATCAGGCCGTATAATTAAGGACTTTTGTATGTCATGTAGAGGATCTGGGGTGGTTGAAGGGATTAAAGAGATTAAAGTTACAATACCATCAGGAAATCTCACAGAGAGTATCATTAGAGTAGTCTCTTTATATTTGGGTATGTCTTTCCTTAGACCAGAAGTTATT 789 0.384 MISSYDKIFIWFPFYAFVVPSFSSAAERDYYRVLGVPETASQDEIKKAFHLLAKKYHPDASKNNPSSKRKFLDIREEYETLRDSKKRAEYDKMRNRGSENIEYGDDDAERFRNAYRSHFSDSFHKVFSEIFEEATQFSSNIEVELTLTFSEAARGCTKHVSFDALIPCDYCNGRGYPQDANPKVCPTCRGSGRVTIPPFTSTCITCKGSGRIIKDFCMSCRGSGVVEGIKEIKVTIPSGNLTESIIRVVSLYLGMSFLRPEVI 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4729g00001 263 SMART dnaj_3 28 86 IPR001623 -
Gabi4729g00001 263 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 21 248 - -
Gabi4729g00001 263 ProSiteProfiles Zinc finger CR-type profile. 155 229 IPR001305 GO:0031072|GO:0051082
Gabi4729g00001 263 Gene3D DnaJ domain 25 139 IPR036869 -
Gabi4729g00001 263 CDD DnaJ_zf 168 224 IPR001305 GO:0031072|GO:0051082
Gabi4729g00001 263 Pfam DnaJ central domain 168 224 IPR001305 GO:0031072|GO:0051082
Gabi4729g00001 263 CDD DnaJ 29 83 IPR001623 -
Gabi4729g00001 263 PRINTS DnaJ domain signature 49 64 IPR001623 -
Gabi4729g00001 263 PRINTS DnaJ domain signature 86 105 IPR001623 -
Gabi4729g00001 263 PRINTS DnaJ domain signature 31 49 IPR001623 -
Gabi4729g00001 263 PRINTS DnaJ domain signature 66 86 IPR001623 -
Gabi4729g00001 263 Gene3D - 168 224 - -
Gabi4729g00001 263 SUPERFAMILY Chaperone J-domain 26 124 IPR036869 -
Gabi4729g00001 263 ProSiteProfiles dnaJ domain profile. 29 94 IPR001623 -
Gabi4729g00001 263 Gene3D - 140 248 - -
Gabi4729g00001 263 Pfam DnaJ domain 29 91 IPR001623 -
Gabi4729g00001 263 FunFam Molecular chaperone DnaJ 160 228 - -
Gabi4729g00001 263 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 155 226 IPR036410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4729g00001 Gabi-Chr4729 3532 6978 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4729g00001 19 96 C2H2 Transcription Factor Family AT1G74250 33.735 6.96e-06 45.1