Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4726g00004 ATGTCATGCCCCCAAATTTCCCTCTCTTTCTCCATTCTCTTCTTAGTCCTCTTAGCACCATTACTCCTAGCACAATCTCCATCTCCTCCTCCTCCAAACCATGCTTCTCTTTCTCCTTCTTCTGCTTGCAAATCCACATTGTATCCAAAACTATGCCGTGCAATACTCTCAGCTATTCGTTTCTCACCTTCTGATCCATATGGTTATGGCAAGTTCTCTATCAAACAAAGCCTCAAACAAGCAAGGAAACTAGCCAAAGTGTTTGAGGACTTCCTCAAACGACACCAATCTTCTTCTCTCAACCATGCAGAGGTTGCTGCATTAGGTGATTGTAGAGACCTCAACAATCTCAATGTGGATTACTTGGGGTCCATCTATGAGGAACTCAAATCAGTTGGTTCTTCTGATACAGAGTTGGTTGAGAAAATTGAAAGTTATCTAAGTGCTGTTGCTACCAACCACTACACTTGCTATGATGGATTGGTTGTGACTAAAAGCAACATTGCAAATGCTCTAGCAGTGCCACTTAAGGATGTGACACAGTTGTACAGTGTGTCACTTGGGTTGGTCTCTGAGGCTCTAAATAGAAACCTCAAAAAGCTTAAGACCCGCAAACATGGCCTTCCCACTAAGGCCTTCAAGGTCAGGCAGCCACTTGAGAAGCTCATCAAGCTTCTTCGCACAAAGTATAGTTGCAATAAATTATCCAATTGTACTAGAACTCAAAGGATTTTGAAAGAAAATGAAAGCCGAGGAATTCTACTCAACGACTTTGTTTTTGTGAGCCCTTATGAGACAGACAACTACACTTCCATTGGAGAAGCTATTGGTGCTGCCCCCAATAACACAAATCCACAAGATGGTTATTTTCTTATCTATGTTAGAGAAGGGTACTATGAGGAATATGTAATTGTTCCCAAAGAAAAGAAGAATATCCTACTAATTGGAGATGGTATTAACAAGACTGTCATCACAGGGAACCATAGTGTCATAGATGGTTGGACAACTTTCAATTCTTCCACCTTTGCTGTTGCTGGAGAAAGATTTATAGCAGTGGATGTTACATTCAGAAACACAGCTGGTCCAGAAAAACACCAAGCTGTAGCAGTAAGAAACAATGCTGATCTCTCCACATTCTACCGTTGCAGTTTTGAAGGATATCAAGACACACTTTATGTTCACTCTTTGAGGCAATTCTACAGGGAATGTGATATCTATGGTACTGTTGACTTCATTTTTGGCAATGCTGCTGTGGTCTTCCAGAGTTGTAACATATATGCAAGAAAACCTATGCCAAACCAGAAGAATGCTTTCACAGCACAAGGAAGAACTGATCCTAATCAAAACACTGGGATTTCAATCCAAAACTGCACAATTGATGCTGCACTAGACTTGGCCATGGACTTGAATTCTACTCAAAGTTACTTAGGTAGGCCTTGGAAGGAGTATTCAAGAACTGTTTATATGCAGTCATATATTGGTGATCTAATTCAACCTGCTGGATGGTTAGAGTGGAATGGCACAGTTGGGTTAGACACCCTCTTTTATGGTGAGTTCGACAACTATGGACCCGGTTCTAATACTAGCAATAGAGTTCAATGGGGTGGTTATAGTGTGTTGAATGCTACTCAAGCTTGGAACTTTACAGTGGTTAATTTTACTTTGGGAGATACATGGCTTCCTGATACAGATATACCTTACGTTGAAGGATTGCTAAATTAG 1722 0.4082 MSCPQISLSFSILFLVLLAPLLLAQSPSPPPPNHASLSPSSACKSTLYPKLCRAILSAIRFSPSDPYGYGKFSIKQSLKQARKLAKVFEDFLKRHQSSSLNHAEVAALGDCRDLNNLNVDYLGSIYEELKSVGSSDTELVEKIESYLSAVATNHYTCYDGLVVTKSNIANALAVPLKDVTQLYSVSLGLVSEALNRNLKKLKTRKHGLPTKAFKVRQPLEKLIKLLRTKYSCNKLSNCTRTQRILKENESRGILLNDFVFVSPYETDNYTSIGEAIGAAPNNTNPQDGYFLIYVREGYYEEYVIVPKEKKNILLIGDGINKTVITGNHSVIDGWTTFNSSTFAVAGERFIAVDVTFRNTAGPEKHQAVAVRNNADLSTFYRCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAVVFQSCNIYARKPMPNQKNAFTAQGRTDPNQNTGISIQNCTIDAALDLAMDLNSTQSYLGRPWKEYSRTVYMQSYIGDLIQPAGWLEWNGTVGLDTLFYGEFDNYGPGSNTSNRVQWGGYSVLNATQAWNFTVVNFTLGDTWLPDTDIPYVEGLLN 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4726g00004 573 CDD PMEI-like_3 41 192 - -
Gabi4726g00004 573 PANTHER PECTINESTERASE 17 561 - -
Gabi4726g00004 573 FunFam Pectinesterase 254 571 - -
Gabi4726g00004 573 Gene3D - 258 573 IPR012334 -
Gabi4726g00004 573 SMART PMEI_2 34 189 IPR006501 GO:0004857
Gabi4726g00004 573 Pfam Pectinesterase 259 556 IPR000070 GO:0030599|GO:0042545
Gabi4726g00004 573 NCBIfam pectinesterase inhibitor domain 10 190 IPR006501 GO:0004857
Gabi4726g00004 573 Gene3D Invertase/pectin methylesterase inhibitor family protein 40 193 IPR035513 -
Gabi4726g00004 573 ProSitePatterns Pectinesterase signature 2. 405 414 IPR033131 -
Gabi4726g00004 573 Pfam Plant invertase/pectin methylesterase inhibitor 40 188 IPR006501 GO:0004857
Gabi4726g00004 573 SUPERFAMILY Pectin lyase-like 256 570 IPR011050 -
Gabi4726g00004 573 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 41 191 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4726g00004 Gabi-Chr4726 87639 91586 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4726g00004 42 573 Carbohydrate Esterase AT3G10720 63.197 0.0 714
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4726g00004 K01051 - gmx:100816503 956.051