Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4724g00037 ATGGATCCAGGGCACTCTCTTCCCCCTCCTTTCCACACAACAAGAGATCTCCATCCTCACCAACATCAATTCCACACTTTAGAAGATGAGCATAGCGGAAGCAGTGGAGGCCTAAACCTTGTGCAGAAAAGGGAAAGGGAAGAAAACAACAACAACAACAACAACAATGGTAGCGAAGGTGAGATAACAAGAAGACCTCGAGGAAGACCAGCTGGATCAAAGAACAAACCGAAGCCACCAATTATCATAACTCGTGACAGTGCAAATGCTTTAAGAACCCACGTGATGGAGGTAGCAGATGGTTGTGACATCGTGGAAAGCGTTTCCAACTTCGCGAGGCGGCGCCAAAGAGGGGTTTGCATCATGAGTGGCACTGGCACCGTCACTAATGTGACTTTGAGGCAACCGGCTACTTCCGGTGCTGTTGTTACTCTTCATGGAAGGTTCGAGATCTTGTCCCTTTCTGGATCATTCCTTCCTCCACCGGCTCCACCGGCTACTTCCGGTTTGACTATATATTTAGCTGGTGGTCAAGGACAGGTGGTAGGTGGAAGTGTTGTTGGCACACTTGTTGCTTCAGGGTCTGTGGTTATCATGGCTTCTTCATTCAGCAACGCTGCTTATGAGAGGTTACCTTTGGAAGATGAGGACCCTTCGCAGCTTCCACCTCATGGTGGTTCAATTGGATCTCCTAGTGGAAGTGGTGTTGGTCATCATCATCAGCATCAGCAATCACAGCTTTTAGGGGATGCAACTGCTCCTCTTTTTCATGGTTTGCCTCCTAATCTTCTCAATTCTATTGAGATGCCTTCCAATGCACACTGGCCAAATAACCTTCCATACATGGGATGA 852 0.48 MDPGHSLPPPFHTTRDLHPHQHQFHTLEDEHSGSSGGLNLVQKREREENNNNNNNNGSEGEITRRPRGRPAGSKNKPKPPIIITRDSANALRTHVMEVADGCDIVESVSNFARRRQRGVCIMSGTGTVTNVTLRQPATSGAVVTLHGRFEILSLSGSFLPPPAPPATSGLTIYLAGGQGQVVGGSVVGTLVASGSVVIMASSFSNAAYERLPLEDEDPSQLPPHGGSIGSPSGSGVGHHHQHQQSQLLGDATAPLFHGLPPNLLNSIEMPSNAHWPNNLPYMG 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4724g00037 283 SUPERFAMILY AF0104/ALDC/Ptd012-like 88 223 - -
Gabi4724g00037 283 MobiDBLite consensus disorder prediction 24 83 - -
Gabi4724g00037 283 FunFam AT-hook motif nuclear-localized protein 91 218 - -
Gabi4724g00037 283 Gene3D - 91 222 - -
Gabi4724g00037 283 ProSiteProfiles PPC domain profile profile. 88 224 IPR005175 -
Gabi4724g00037 283 PIRSF ESCAROLA 10 281 IPR014476 GO:0003680
Gabi4724g00037 283 Pfam Plants and Prokaryotes Conserved (PCC) domain 92 205 IPR005175 -
Gabi4724g00037 283 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 35 276 IPR014476 GO:0003680
Gabi4724g00037 283 CDD DUF296 92 175 IPR005175 -
Gabi4724g00037 283 MobiDBLite consensus disorder prediction 214 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4724g00037 Gabi-Chr4724 459697 460548 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4724g00037 42 280 AT-hook Motif Nuclear Localized (AHL) Family AT3G60870 58.468 1.32e-78 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4724g00037 - - gmx:100781436 375.17