Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4724g00036 ATGGGTTCTCAGCAGAACGAAGGAACAAGCTATCAGCCTTCAGAGCGGAAGCCCTGCGCCAACAACTGCGGCTTCTTTGGCACAGCCAAGAATCGGAACCTCTGTTCCAAATGCTTCAGAGACGTGTGTATTCAAGAAGCTCATGCTGCTTCGGCCAAAGCCACCATGGAGAAATCCCTGCTCCATTCCAGTGCCGCCGCCGTCGAAGCCGCCGTAGTGCCATCCCTCGACGTGGCCATTCGTGTGGCGGAGCCCTCCTCGTCCTCAGAGCTGTCGAAGCCGTCGAAGGTAGCGAACCGTTGCGGGAGTTGTAACAAGAAAGTGGGTTTGACAGGGTTTGTGTGCAAGTGTGGGACCACCTTCTGTGGGACACATCGTTATCCGGAGAAGCACCAATGCTCGTATGATTTCAAGGGTGCCGGACGTGATGTGATTTCCAAGGCTAATCCTTCGATTAAGGCAGACAAGATCGCTAGATTTTAG 483 0.5404 MGSQQNEGTSYQPSERKPCANNCGFFGTAKNRNLCSKCFRDVCIQEAHAASAKATMEKSLLHSSAAAVEAAVVPSLDVAIRVAEPSSSSELSKPSKVANRCGSCNKKVGLTGFVCKCGTTFCGTHRYPEKHQCSYDFKGAGRDVISKANPSIKADKIARF 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4724g00036 160 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 19 63 - -
Gabi4724g00036 160 Pfam AN1-like Zinc finger 101 137 IPR000058 GO:0008270
Gabi4724g00036 160 Gene3D - 78 156 IPR035896 -
Gabi4724g00036 160 Gene3D - 3 64 - -
Gabi4724g00036 160 FunFam Zinc finger AN1-type containing 6 77 156 - -
Gabi4724g00036 160 ProSiteProfiles Zinc finger A20-type profile. 13 47 IPR002653 GO:0003677|GO:0008270
Gabi4724g00036 160 SUPERFAMILY AN1-like Zinc finger 86 155 IPR035896 -
Gabi4724g00036 160 Pfam A20-like zinc finger 18 40 IPR002653 GO:0003677|GO:0008270
Gabi4724g00036 160 PANTHER AN1-TYPE ZINC FINGER PROTEIN 18 159 - -
Gabi4724g00036 160 ProSiteProfiles Zinc finger AN1-type profile. 95 141 IPR000058 GO:0008270
Gabi4724g00036 160 SMART AN1_Zf_4 101 138 IPR000058 GO:0008270
Gabi4724g00036 160 SMART A20_3 16 40 IPR002653 GO:0003677|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4724g00036 Gabi-Chr4724 447419 447901 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4724g00036 13 160 C2H2 Transcription Factor Family AT3G52800 40.373 1.55e-35 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4724g00036 - - qsa:O6P43_024274 197.593