Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4724g00019 ATGGCGGCAGAGTCACTGAGGTTGTCGTCTTCGTCTCTTTGCAATCTTAATGGTTCTCAGAGGAGGCCAACCCCTCTCTCTGCGGTTCGCTTCATGGGTCTTCGGCCTCGACCCTTTTACTCTTTCCCTTCATCTTCCCTTTCACTATTCTTTGGGAGTAACCGAATCAACTCCAATTCTTCCAATTCACGCCAACTTGCTCCAAGAAGAAACTTTTCTGTTTTCGCTATGTCCGCTGATGAAACAAAGCGCGCTATTCCTTTGAAGGATTATCGCAACATTGGCATCATGGCTCACATTGATGCTGGAAAAACAACTACAACCGAACGAATTCTCTTCTACACTGGAAGAAACTACAAAATTGGAGAGGTACATGAGGGAACAGCAACTATGGACTGGATGGAACAAGAACAAGAAAGAGGGATTACCATTACTTCTGCTGCAACCACTACATTTTGGAATAAGCACCGGATTAACATCATTGATACTCCCGGTCATGTTGACTTCACCTTAGAAGTGGAGCGTGCTCTTAGGGTTTTGGATGGAGCTATATGCTTGTTTGACAGTGTTGCCGGTGTGGAACCACAATCAGAAACCGTGTGGAGGCAAGCTGATAAATATGGGGTCCCACGAATTTGTTTTGTCAATAAAATGGACCGTCTTGGTGCAAACTTTTTTCGAACAAGAGACATGATTATAACAAATTTAGGTGCCAAACCACTTGTAGTTCAGTTACCAATCGGTTCAGAAGATAGCTTTAAGGGAGTTGTTGATCTTGTTAGGATGAAAGCTATAGTTTGGTCTGGAGAAGAGCTGGGTGCCAAGTTTGATTATGTTGATATTCCAGCTGATCTTCAGGAGCAGGCTAAGGATTACCGATCCCAGATGCTAGAAACCATAGTTGAGTTCGATGATGTGGCTATGGAGAACTACCTGGAAGGAATTGAACCAGATGAAGAAACTATAAATAAATTAATTAGGAAGGGAACTATATCAGCCAGTTTTGTGCCAGTGTTGTGTGGCTCAGCTTTCAAGAACAAGGGGGTCCAACCATTGCTTGATGCTGTAGTGGATTATCTACCGTCACCACTTGACGTGCCACCAATGAAGGGTACTGACCCCGAAAACCCAGAAGTGACAATAGAGAGGATAGCAAGAGATGATGAACCATTTTCTGGACTAGCTTTTAAGATCATGAGTGATCCATTTGTAGGCTCCCTTACGTTTGTCAGGGTGTATGCTGGAAAGCTAAGTGCAGGGACTTATGTACTCAATGCAAACAAGGGGAAAAAGGAGAGAATTGGTAGACTTCTAGAAATGCATGCAAACAGCAGAGAGGACGTTAAAGTGGCATTAGCAGGTGATATTATTGCTCTTGCAGGTTTAAAAGATACTATTACGGGTGAAACTTTGTGTGACCCTGATAATCCTATCATGCTTGAGCGGATGGACTTCCCTGATCCTGTGATTAAGGTTGCAATTGAACCCAAAACTAAGGCTGATGTTGACAAGATGGGAGCTGGTCTAGTGAAGCTTGCACAGGAAGACCCTTCTTTCCACTTCTCACGCGACGAAGAGGTAAACCAGACAGTGATTGAAGGAATGGGAGAATTACATCTTGAAATCATTGTTGATCGACTCAAAAGAGAATTTAAGGTGGAAGCTAATGTTGGTGCTCCCCAAGTAAACTACAGGGAAAGCATTTCCAGAATCTCGGAAGTGAAGTATGTGCACAAGAAACAATCAGGTGGACAAGGTCAGTTTGCTGATATCACTGTACGGTTTGAACCTATGGATCCAGGTAGCGGATATGAGTTCAAGAGTGAAATCAAAGGAGGTGCTGTACCAAGAGAATACATTCCGGGGGTGATGAAAGGATTGGAAGAGTGTATGAGCAACGGTGTGCTTGCTGGATTTCCAGTTGTTGATGTACGTGCAGTACTTGTGGAAGGTTCTTACCACGATGTAGATTCAAGCGTGCTGGCATTCCAGTTGGCAGCAAGAGGAGCTTTTCGGGAAGGAATGAGGAAAGCTGGACCAAGGATGCTTGAACCTGTAATGAAGGTTGAAGTTGTTACTCCTGAAGAACATCTAGGTGATGTAATTGGCGATCTCAACTCAAGAAGAGGACAGATCAACAGTTTTGGTGACAAACCGGGTGGCCTCAAGGTGGTCGATGCTCTAGTACCTCTTGCTGAGATGTTTCAGTACGTGAGTACACTCAGAGGGATGACAAAGGGTCGTGCATCCTACACAATGCAATTAGGCATGTTTGATGTGGTGCCTCAGCACATTCAGAATCAACTTGCCACGAAGGAGCAAGAAGTTGCCGCTTAA 2337 0.4424 MAAESLRLSSSSLCNLNGSQRRPTPLSAVRFMGLRPRPFYSFPSSSLSLFFGSNRINSNSSNSRQLAPRRNFSVFAMSADETKRAIPLKDYRNIGIMAHIDAGKTTTTERILFYTGRNYKIGEVHEGTATMDWMEQEQERGITITSAATTTFWNKHRINIIDTPGHVDFTLEVERALRVLDGAICLFDSVAGVEPQSETVWRQADKYGVPRICFVNKMDRLGANFFRTRDMIITNLGAKPLVVQLPIGSEDSFKGVVDLVRMKAIVWSGEELGAKFDYVDIPADLQEQAKDYRSQMLETIVEFDDVAMENYLEGIEPDEETINKLIRKGTISASFVPVLCGSAFKNKGVQPLLDAVVDYLPSPLDVPPMKGTDPENPEVTIERIARDDEPFSGLAFKIMSDPFVGSLTFVRVYAGKLSAGTYVLNANKGKKERIGRLLEMHANSREDVKVALAGDIIALAGLKDTITGETLCDPDNPIMLERMDFPDPVIKVAIEPKTKADVDKMGAGLVKLAQEDPSFHFSRDEEVNQTVIEGMGELHLEIIVDRLKREFKVEANVGAPQVNYRESISRISEVKYVHKKQSGGQGQFADITVRFEPMDPGSGYEFKSEIKGGAVPREYIPGVMKGLEECMSNGVLAGFPVVDVRAVLVEGSYHDVDSSVLAFQLAARGAFREGMRKAGPRMLEPVMKVEVVTPEEHLGDVIGDLNSRRGQINSFGDKPGGLKVVDALVPLAEMFQYVSTLRGMTKGRASYTMQLGMFDVVPQHIQNQLATKEQEVAA 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4724g00019 778 Gene3D - 566 769 IPR014721 -
Gabi4724g00019 778 Hamap Elongation factor G [fusA]. 87 773 IPR004540 GO:0003746|GO:0005525|GO:0006414
Gabi4724g00019 778 CDD EFG_mtEFG_II 391 473 - -
Gabi4724g00019 778 SUPERFAMILY EF-G C-terminal domain-like 684 773 IPR035647 -
Gabi4724g00019 778 Gene3D Translation factors 374 488 - -
Gabi4724g00019 778 Pfam Elongation factor Tu GTP binding domain 90 362 IPR000795 GO:0003924|GO:0005525
Gabi4724g00019 778 SUPERFAMILY Translation proteins 345 485 IPR009000 -
Gabi4724g00019 778 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 89 364 IPR000795 GO:0003924|GO:0005525
Gabi4724g00019 778 Pfam Elongation factor G C-terminus 682 768 IPR000640 -
Gabi4724g00019 778 Pfam Elongation Factor G, domain III 485 558 IPR041095 -
Gabi4724g00019 778 CDD EF-G 93 363 - -
Gabi4724g00019 778 FunFam Elongation factor G 566 696 - -
Gabi4724g00019 778 PRINTS GTP-binding elongation factor signature 93 106 IPR000795 GO:0003924|GO:0005525
Gabi4724g00019 778 PRINTS GTP-binding elongation factor signature 139 147 IPR000795 GO:0003924|GO:0005525
Gabi4724g00019 778 PRINTS GTP-binding elongation factor signature 211 220 IPR000795 GO:0003924|GO:0005525
Gabi4724g00019 778 PRINTS GTP-binding elongation factor signature 159 169 IPR000795 GO:0003924|GO:0005525
Gabi4724g00019 778 PRINTS GTP-binding elongation factor signature 175 186 IPR000795 GO:0003924|GO:0005525
Gabi4724g00019 778 SMART EFG_C_a 681 769 IPR000640 -
Gabi4724g00019 778 FunFam Elongation factor G 82 373 - -
Gabi4724g00019 778 FunFam Elongation factor G 489 565 - -
Gabi4724g00019 778 NCBIfam small GTP-binding protein domain 91 261 IPR005225 GO:0005525
Gabi4724g00019 778 CDD EFG_III 486 561 IPR009022 -
Gabi4724g00019 778 FunFam Elongation factor G 685 756 - -
Gabi4724g00019 778 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 132 147 IPR031157 -
Gabi4724g00019 778 Gene3D Elongation Factor G (Translational Gtpase), domain 3 489 565 - -
Gabi4724g00019 778 PANTHER TRANSLATION ELONGATION FACTOR G-RELATED 65 774 - -
Gabi4724g00019 778 Hamap Elongation factor G, chloroplastic. 81 778 IPR030848 GO:0003746|GO:0006414|GO:0009507
Gabi4724g00019 778 CDD EFG_mtEFG_C 684 762 IPR035649 -
Gabi4724g00019 778 Gene3D - 82 373 IPR027417 -
Gabi4724g00019 778 Pfam Elongation factor Tu domain 2 405 472 IPR004161 GO:0005525
Gabi4724g00019 778 SUPERFAMILY EF-G C-terminal domain-like 485 562 IPR035647 -
Gabi4724g00019 778 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 87 362 IPR027417 -
Gabi4724g00019 778 Pfam Elongation factor G, domain IV 560 678 IPR005517 GO:0005525
Gabi4724g00019 778 SMART EFG_IV_2 561 679 IPR005517 GO:0005525
Gabi4724g00019 778 Gene3D - 685 756 - -
Gabi4724g00019 778 FunFam Elongation factor G 373 488 - -
Gabi4724g00019 778 CDD EFG_mtEFG1_IV 564 679 IPR005517 GO:0005525
Gabi4724g00019 778 SUPERFAMILY Ribosomal protein S5 domain 2-like 560 680 IPR020568 -
Gabi4724g00019 778 NCBIfam elongation factor G 84 773 IPR004540 GO:0003746|GO:0005525|GO:0006414
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4724g00019 Gabi-Chr4724 316824 320909 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4724g00019 407 568 Eukaryotic Initiation Factors Gene Family AT3G22980 32.022 1.72e-11 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4724g00019 K02355 - gmx:102663021 1394.41