Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4724g00016 ATGGACTCTTTCTTTTTCATTGCTCTCACTTTCGCATTGAGCTTCCTTATTCATTTTGCACAAGGAAGTGAACTGCCCCTTACCACTGAGAGTACCGAGACAAGCAGTTCAAAAACATACATTATCCATGTGGAAAGGCCAGAGTCTAAGATATTTACTCAATCAGAAGATTTGGAGAGCTGGTACCATTCATTCATGCCACCTACTATTATGAGCTCCAACGAACAGCCACGAATGATTTATTCATACCGGAACGTGCTGAGTGGTTTTGCTGCAAGACTCACTCAAGAGGAACTGAGAGCTGTGGAAAAGAAGGATGGCTTTATTTCAGCTCATCCCGAAATGATACTACATCGTCAAACCACACATACCCCAAAATTTTTGGGGTTGCAGCAAAAAATGGGACTATGGAAGGAATCAAATTTTGGAAAGGGAGTTATTATTGGGATAGTGGATTCTGGAATCACGCCTAATCATCCTTCATTCAGTGACGCAGGAATACCACCACCACCACCCAAATGGAAAGGGAGATGCGAACTTAATGGGACAGCATGTAACAACAAACTAATTGGAGCAAGGTCTTTCAACATCGCAGCTATGGCAATGAAAGAAGGGAAAGAAGAGACACCAATTGATGAGGATGGACACGGGACTCACACAGCAAGCACAGCAGCGGGTGCTTTTGTGAAGCATGCACAAGTACTAGGAAATGCCAAAGGCACAGCAGCAGGGATGGCCCCTCATGCTCACCTGGCAATTTACAGAGTATGCTATGAAGATGACTGCGCCGAGAGCGATATACTAGCTGGGTTAGATGCAGCCGTCGAAGATGGCGTGGATGTAATATCAATATCCCTTGGTTCAAGAGAGCCACCTTCATCTTTCAGTGATAGCATTGCAATAGGTGCATTTGCAGCAATTCAGAAGGGAATATTCGTGAGTTGTGCAGCAGGAAACTATGGCCCTTCCAGTGGCACCGTAGTTAACGGAGCCCCATGGATCCTCACAGTGGGAGCAAGCACTATTGACAGAAGCTTTGTTGCAACAGCAAAGCTTGGAAATGGGCAAGAGTTTGATGGTGAATCTGCTTTCCAGCCTTCCAATTTTTCTCCGAGATTGCTACCCTTAGTGTATGCTGGAAAGAATGGCAAAAAAGAATCTGCTTTTTGTGCTAACGGATCCTTGAATGGCAATGATTTCAGAGGCAAGGTTGTTTTGTGTGAGAAAGGAGGGGGTAGAGGAAGAATTGAAAAAGGAGCAGAAGTAAAAAGAGCAGGTGGTGCAGCCATGATTCTCATGAATGATGAAATCAGTGGCTTCAGTCTGGGAGCTGATGTACATGTTCTGCCTGCAACGCATGTGAGCCATGCTGCTGGAGTAAAGATTAAGGCCTATATAAGTTCCACTACAAAACCTAAAGCAACCATTTTATTTAAGGGAACTATAATCGGAAACTCCCTAGCTCCTGCAGTTACATACTTCTCTTCAAGAGGTCCCAACCTGCCAAGTCCTGGTATTTTGAAACCAGATATCATAGGACCAGGCCAGAGCATCCTAGCTGCCTGGCCATTCTCCCAGAATAACAACACCAATTCAAAACTCAATTTCAACATAGTGTCTGGCACATCAATGTCATGCCCACATCTTAGTGGCATTGCTGCTTTGCTCAAAAGCTCTCATCCTCACTGGTCACCAGCTGCCATAAAATCTGCCATGATGACTTCTGCAGAGATACTAAATTTAGAACACAAACCCATTGTTGATGAAACACTTCAGCCTGCAGATATCTTTGCCACAGGTTCCGGCCACGTGAATCCATCAAGAGCAAATGATCCTGGATTAGTATATGATATCCAACCTGATGATTATATACCTTATTTGTGCGGTTTAGGCTACAGTGATAGGGAAGTGGGTATCTTTGCACGTAGAGCAATTAAGTGCTCTCAAACTTCAATCATTCCCGAAGGAGAGCTCAACTACCCCTCATTTTCTGTTGTGCTTGGTTCCTCACAGACATTCACAAGGACTGTGACAAATGTTGGTGATATCTATTCATCTTATGTTGTCATAGTTACGGCACCAGAAGGGGTTGATGTGAAGGTCCGGCCTAATAAGCTTCATTTTTCAAGAGCAAACCAGGAAAAGACATATTCAGTGACATTCAGCCGTATGGGAGTGGGTAATAAGAGAGGGGAATATGCTCAAGGGTTCCTAAAGTGGGTCTCTGCTAAACACACTGTAAGGAGCCCTATCTCCGTCAAATTTGTATAA 2271 0.4417 MDSFFFIALTFALSFLIHFAQGSELPLTTESTETSSSKTYIIHVERPESKIFTQSEDLESWYHSFMPPTIMSSNEQPRMIYSYRNVLSGFAARLTQEELRAVEKKDGFISAHPEMILHRQTTHTPKFLGLQQKMGLWKESNFGKGVIIGIVDSGITPNHPSFSDAGIPPPPPKWKGRCELNGTACNNKLIGARSFNIAAMAMKEGKEETPIDEDGHGTHTASTAAGAFVKHAQVLGNAKGTAAGMAPHAHLAIYRVCYEDDCAESDILAGLDAAVEDGVDVISISLGSREPPSSFSDSIAIGAFAAIQKGIFVSCAAGNYGPSSGTVVNGAPWILTVGASTIDRSFVATAKLGNGQEFDGESAFQPSNFSPRLLPLVYAGKNGKKESAFCANGSLNGNDFRGKVVLCEKGGGRGRIEKGAEVKRAGGAAMILMNDEISGFSLGADVHVLPATHVSHAAGVKIKAYISSTTKPKATILFKGTIIGNSLAPAVTYFSSRGPNLPSPGILKPDIIGPGQSILAAWPFSQNNNTNSKLNFNIVSGTSMSCPHLSGIAALLKSSHPHWSPAAIKSAMMTSAEILNLEHKPIVDETLQPADIFATGSGHVNPSRANDPGLVYDIQPDDYIPYLCGLGYSDREVGIFARRAIKCSQTSIIPEGELNYPSFSVVLGSSQTFTRTVTNVGDIYSSYVVIVTAPEGVDVKVRPNKLHFSRANQEKTYSVTFSRMGVGNKRGEYAQGFLKWVSAKHTVRSPISVKFV 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4724g00016 756 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 40 753 IPR045051 -
Gabi4724g00016 756 SUPERFAMILY Subtilisin-like 120 614 IPR036852 GO:0004252|GO:0006508
Gabi4724g00016 756 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 119 IPR037045 -
Gabi4724g00016 756 ProSiteProfiles Serine proteases, subtilase domain profile. 127 610 - -
Gabi4724g00016 756 Pfam Subtilase family 143 577 IPR000209 GO:0006508|GO:0008236
Gabi4724g00016 756 Gene3D - 343 484 - -
Gabi4724g00016 756 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 148 159 IPR023827 -
Gabi4724g00016 756 Pfam Peptidase inhibitor I9 39 118 IPR010259 -
Gabi4724g00016 756 Pfam Fibronectin type-III domain 657 753 IPR041469 -
Gabi4724g00016 756 PRINTS Subtilisin serine protease family (S8) signature 143 162 IPR015500 -
Gabi4724g00016 756 PRINTS Subtilisin serine protease family (S8) signature 212 225 IPR015500 -
Gabi4724g00016 756 PRINTS Subtilisin serine protease family (S8) signature 540 556 IPR015500 -
Gabi4724g00016 756 Gene3D Peptidase S8/S53 domain 145 623 IPR036852 GO:0004252|GO:0006508
Gabi4724g00016 756 Pfam PA domain 375 461 IPR003137 -
Gabi4724g00016 756 FunFam Subtilisin-like protease SBT1.5 145 359 - -
Gabi4724g00016 756 CDD PA_subtilisin_like 349 476 - -
Gabi4724g00016 756 Gene3D - 627 755 - -
Gabi4724g00016 756 FunFam subtilisin-like protease SBT1.5 343 483 - -
Gabi4724g00016 756 CDD Peptidases_S8_3 117 576 IPR034197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4724g00016 Gabi-Chr4724 256606 258876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4724g00016 5 755 Subtilisin-like Serine Gene Family AT1G04110 43.687 0.0 609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4724g00016 - - gmx:100812208 1202.58