Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4719g00058 ATGTCATTAGTTAGGACTGCTGAGGTAGCTCCTACATCGTATAAAAATACCAAGCTCTACTCATTAAAGGGAACCGATGCTAGACCTGACTTGTCCTCCCAAATGTTTGGTTCTGATAAGCATAGAACCGTGTACATGACAGATACTTACTCCAGTGAGAGTTATGAGAAGTACTTCCATGACTCACAAACAGAAGAACTGATAGAACCATCTAGTTCCGGCATCTCTGGAAGTTCAATTCACCCTGAGGGTGCATCTTCTTACCAGCTCAGAGCTAGTTCAGGAGCTAGTATGGTTGCTAATGACCCATTTGATACATCTTTCATGTCTACGAGGCACCATGATGTCTATGAGTCCAACTATGGATCAGATTTGTTGGAAAATGGAAGCCTGGACTCATTTGAGGATGATGGTCTAATGAGATTAAAACTACAAGCATTGGAGAGGGCATTGCTTAATGATAGTGATGGTGAGGAGGAGGAAGAAGACATATTTGGAACTGCTCAAAGCATGGAAATTGATCCTGACATAGCTGAGTGGGCTGATCCCGTTCAGAATATGCTGCTCTATGACTCACCAAAGGAGTATTCATCTTCAGATTCCATTATTAGCAGTATCAGCAGCAGCAAAGAAATATCACATATTTCTCGGACCCCCAAGCAACTGCTTTATGAATGTGCTATTGCACTTTCAGAAGGAAATGAAGAGGAAGCCTTATCTATGATAAACAATCTCCGGAAAATGGTCTCAATTCAAGGAGATCCATACCAAAGAATTGCAGCATATATGGTGGAGGGACTTGCAGCTCGCTTGGCTGAATCTGGCAAAAGCATTTATAAAGCTCTGAAATGCAAGGAACCTCCTTCTTCAGACCGTCTAGCAGCCATGCAGATACTATTTGAGGTTTGCCCATGTTTTAAATTTGGATTTATTGCTGCTAACAATGCAATTTCAGAGGCAGTTAAAGATGACATGAAGGTTCATATAATAGATTTTGACATCAATCAAGGAAGTCAATACATAAATCTAATTCAAATACTTGCTTCAAGGTCAAGTAAGCCACCCCATGTTAGATTAACTGGGGTTGATGATCCTGAGTCTGTGCAGAGATCAGTTGGAGGCTTAAAGATCATAGGACTAAGACTTGAAAAACTTGCAGAAGTACTCGGGATGCCATTCGAGTTTCGAGCAGTAGCATCAAGGGTTTCAGTTGTCACCCCATCAATGCTCAATTGTCTTCCTGGAGAAGCACTTGTGGTGAACTTTGCATTCCAGCTTCATCACATGCCTGATGAGAGTGTTTCAACAGTAAATGAAAGAGACCAACTTCTTCGCTTGGTGAAGAGCCTGAAACCAAAGCTTGTAACAGTTGTGGAGCAAGATGTAAACACTAACACCACCCCCTTCTTACCGAGATTTATTGAAGCCTACAAATACTACTCTGCTGTGTTTGAGTCTCTTGATGTTACCCTTCCAAGAGAAAGCCAGGACAGGATGAATGTTGAAAGACAATGCTTAGCGAGGGACATTGTGAATATTGTTGCATGTGAAGGCGAGGATAGGATAGAACGGTATGAATTTGCAGGAAAATGGAGAGCAAGGATGACAATGGCTGGCTTCACTACATCTCCAATGAGCACAAATGTGGCTGATGAAATCCGAAAACTCATAAAGATGTACTGCGACAGGTACAAGATAAAGGAGGAAATGGGTGCTCTTCATTTTGGTTGGGAAGACAAAAACTTGATTGTTGCTTCAGCATGGAGGTGA 1770 0.4186 MSLVRTAEVAPTSYKNTKLYSLKGTDARPDLSSQMFGSDKHRTVYMTDTYSSESYEKYFHDSQTEELIEPSSSGISGSSIHPEGASSYQLRASSGASMVANDPFDTSFMSTRHHDVYESNYGSDLLENGSLDSFEDDGLMRLKLQALERALLNDSDGEEEEEDIFGTAQSMEIDPDIAEWADPVQNMLLYDSPKEYSSSDSIISSISSSKEISHISRTPKQLLYECAIALSEGNEEEALSMINNLRKMVSIQGDPYQRIAAYMVEGLAARLAESGKSIYKALKCKEPPSSDRLAAMQILFEVCPCFKFGFIAANNAISEAVKDDMKVHIIDFDINQGSQYINLIQILASRSSKPPHVRLTGVDDPESVQRSVGGLKIIGLRLEKLAEVLGMPFEFRAVASRVSVVTPSMLNCLPGEALVVNFAFQLHHMPDESVSTVNERDQLLRLVKSLKPKLVTVVEQDVNTNTTPFLPRFIEAYKYYSAVFESLDVTLPRESQDRMNVERQCLARDIVNIVACEGEDRIERYEFAGKWRARMTMAGFTTSPMSTNVADEIRKLIKMYCDRYKIKEEMGALHFGWEDKNLIVASAWR 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4719g00058 589 MobiDBLite consensus disorder prediction 68 88 - -
Gabi4719g00058 589 ProSiteProfiles GRAS family profile. 210 589 IPR005202 -
Gabi4719g00058 589 Pfam GRAS domain family 220 589 IPR005202 -
Gabi4719g00058 589 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 195 584 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4719g00058 Gabi-Chr4719 813979 817725 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4719g00058 1 589 GRAS Transcription Factor Family AT1G21450 62.416 0.0 701
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gabi4719g00058 GRAS 5.8e-135 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4719g00058 - - gmx:100798897 988.408