Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4719g00055 ATGATGGGGCCTCCGGGGCCGCCCACTCCCATTGGTGGTGCCCAGTCTGTTTCACCCTCTCTATTGAGATCAAATTCAGGAATGCTAGGAGCTCAAGGGGGTCCGGGTCCTGTGCCTTCGCAGACATCTTTCCCATCACTTTTGTCTCCGCGTACTCAGTTCAACAACATGAACATTCTAGGAAATATGTACAATGTAACTTCCTTACTGAATCAATCTTTCCCAAATGGAGTTCCAAATCCTGGGCTCTCCGGTCCAGGGAGTAGCCAGCGTGGAGGGGTTGATACCGGAGCTGAAACAGATCCACTCTCCGGTGTTGGTAATGGAATGAACTTCAGTAATTCTTCATCCACATTTGTACAATCTAATATGGTGAATGCTGGTTCCTCTGGTCAAGGTCAGGGTCAACAATTTTCAAACCCTTCTAGTAATCAGTTGTTGCCAGATCAACAGCATTCCCAACAGCTTGAACCTCAAAATTTCCAACACAGTCAGCAGTCATTGCAACAGTTCTCTGCTCCTCTGAATACACAGCAGCAACAACAGCAGCATTTTCAATCGATTCGAGGAGGGATAGGTGCTATGGGATCAGTAAAGTTGGAGCCCCAGGTAAACAACGATCAACTTGGACAGCAGCAGCAACAGCAACAGCAACAGCAGTTGCAATCATTGAGGAATCTTGCTCCAGTGAAATTGGAACCACAACAAATTCAAACAATGAGAACTCTGGCACCAGTTAAAATGGAGCCGCAGCATTCTGATCAACCATTATTTTTGCAGCAGCAACAACAACAGCAGCAACAACAGCAACATCAGCAGCAGTTGTTCCACTTGTCAAAGCAATCCTCTCAGGCTGCTGCTGCTCAGATCAATCTTTTGCACCATCACAGGCTTTTGCAATTACAACAACAACACCAGCAGCAACAACTCTTGAAGGCAATGCCTCAACAACGGTCTCAACTACCACAGCAATTTCAACAGCAGAATATGTCTATAAGGTCTCCTGTGAAATCTGTATATGAACCTGGGATGTGCGCTAGGCGGTTGACACATTACATGTATCAGCAACAACATAGACCTGATGATAACAATATTGAGTTCTGGAGGAAGTTTGTTGCTGAGTATTATGCTCCCAATGCCAAGAAGAAGTGGTGTGTTTCTATGTATGGAAGTGGCAGACAAACAAATGGAGTTTTCCCTCAGGATGTATGGCACTGCGAAATATGTAATCGCAAACCTGGCCGCGGGTTTGAGGCAACTGTTGAGGTTCTTCCCAGGCTTTTCAAGATAAAGTATGAAAGTGGTACTTTGGAAGAGCTACTTTATGTTGACATGCCCCGCGAATATCATAATTCCTCTGGCCAGATTGTTCTAGATTATGCAAAAGCAATACAAGAAAGTGTTTTTGAGCAACTTCGTGTTGTTCGTGATGGTCAACTCCGAATAGTTTTCTCTCCAGATCTGAAGATATGCTCTTGGGAATTTTGTGCTCGGCGCCATGAAGAGCTCATCCCCAGAAGATTGTTAATACCTCAGGTTAGTCAGCTTGGAGCGGCTGCTCAAAAATATCAGGCTGTTACTCAAAATGCAACGCCCAATATATCTGTTCCAGAGTTACAAAATAATTGCAATATGTTTGTTTCATCAGCCCGTCAGTTGGCTAAAGCTTTAGAAGTTCCATTAGTTAATGATTTAGGATATACGAAGAGATATGTGCGCTGCCTACAAATATCAGAAGTGGTAAATAGTATGAAAGACTTGATAGATTACAGCAGAGAAACAGGGACTGGTCCTATGGAGAGCTTGGTCAAATTCCCTCGGAGAACAAGCGGTTCATCTGGACTTCGTAGTCAAGCACAACATGAAGATCAATTACAGCAGCAACAACAGCAAATGGTGGGTCATAACTCAAATGGTGATCAAAACTCAGCTCAAGCTGCTGCCATGCAAATTGCCTCTAGTAGCAATGGTATGGTTAGTGTAAATAACTCTGTCAACTCAGCATCCACATCAACCACCACAAGTACTATTGTTGGACTTCTCCATCAGCACTCTATGAATTCTAGACAACAAAGTTCAATAAACAATGCAAGCAGTCCATATGGAGGTAGTTCTGTTCAGATTCCATCCCCAGGTTCCTCCAGTACCGTGCCACCAGCCCAGCCAAATTCATCCCCTTTTCAATCACCAACACCATCCTCGTGTAACAACCCCCCGCAAACATCTCACCCTGCCTTAATGTCGACCAATCACATAAGTACAGCAAACTCACCAGCTAATATTTCCTTGCAACAACAGCAGGCATCTCTTTCTGGTGAAGCTGATCCTAGTGATGCTCAGAGCTCAGTCCAGAAAATCATACATGAGATGATGATATCATCCCAGATTAATGGCACAGGTGGAATGGTAGGTGTTGGTTCCCTTGGAAATGAGGTGAAGAATGTAAATGGTATTCTGCCAGTGAATGCCAATACAGGGCTCAACAATGGAAATGGCCTGGTGGGCAATGGCACACCTAACAGTAATTCTGGTGTTGGTGTTGGTAGCTATGGCACAATGGGTCTTGGGCAATCCACTATGCCTAATGGAATCAGGTCTGCTATGGTAAATAATTCAGTTATGAATGGAAGGGGAGGAATGGCATCTATTGCTCGGGATCAAGCTATGAATCATCAACAGGATTTGTCAAACCAGTTACTTAGTGGGCTAGGAGCAGTAAATGGTTTTAATAATCTTCAATTTGATTGGAAACCTTCTCCATGA 2763 0.4412 MMGPPGPPTPIGGAQSVSPSLLRSNSGMLGAQGGPGPVPSQTSFPSLLSPRTQFNNMNILGNMYNVTSLLNQSFPNGVPNPGLSGPGSSQRGGVDTGAETDPLSGVGNGMNFSNSSSTFVQSNMVNAGSSGQGQGQQFSNPSSNQLLPDQQHSQQLEPQNFQHSQQSLQQFSAPLNTQQQQQQHFQSIRGGIGAMGSVKLEPQVNNDQLGQQQQQQQQQQLQSLRNLAPVKLEPQQIQTMRTLAPVKMEPQHSDQPLFLQQQQQQQQQQQHQQQLFHLSKQSSQAAAAQINLLHHHRLLQLQQQHQQQQLLKAMPQQRSQLPQQFQQQNMSIRSPVKSVYEPGMCARRLTHYMYQQQHRPDDNNIEFWRKFVAEYYAPNAKKKWCVSMYGSGRQTNGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQAVTQNATPNISVPELQNNCNMFVSSARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETGTGPMESLVKFPRRTSGSSGLRSQAQHEDQLQQQQQQMVGHNSNGDQNSAQAAAMQIASSSNGMVSVNNSVNSASTSTTTSTIVGLLHQHSMNSRQQSSINNASSPYGGSSVQIPSPGSSSTVPPAQPNSSPFQSPTPSSCNNPPQTSHPALMSTNHISTANSPANISLQQQQASLSGEADPSDAQSSVQKIIHEMMISSQINGTGGMVGVGSLGNEVKNVNGILPVNANTGLNNGNGLVGNGTPNSNSGVGVGSYGTMGLGQSTMPNGIRSAMVNNSVMNGRGGMASIARDQAMNHQQDLSNQLLSGLGAVNGFNNLQFDWKPSP 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4719g00055 920 Coils Coil 618 638 - -
Gabi4719g00055 920 MobiDBLite consensus disorder prediction 13 27 - -
Gabi4719g00055 920 MobiDBLite consensus disorder prediction 685 753 - -
Gabi4719g00055 920 MobiDBLite consensus disorder prediction 1 49 - -
Gabi4719g00055 920 MobiDBLite consensus disorder prediction 606 651 - -
Gabi4719g00055 920 MobiDBLite consensus disorder prediction 77 95 - -
Gabi4719g00055 920 Pfam LIM-domain binding protein 348 602 IPR029005 -
Gabi4719g00055 920 MobiDBLite consensus disorder prediction 592 651 - -
Gabi4719g00055 920 PANTHER LIM DOMAIN-BINDING PROTEIN 230 909 IPR029005 -
Gabi4719g00055 920 MobiDBLite consensus disorder prediction 106 168 - -
Gabi4719g00055 920 MobiDBLite consensus disorder prediction 77 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4719g00055 Gabi-Chr4719 801883 809447 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4719g00055 2 916 C2H2 Transcription Factor Family AT1G43850 59.623 0.0 764
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4719g00055 - - gmx:100799771 1422.53