Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4719g00014 ATGATGGAACAGAGTAGTATCCTATGCAAATACACAGTGCATCACAACGTTACCAAGAAGCTGGTCTCACCAAAGAAGAAGGCTTCCGATGCAAAGAGCCACCCCATAGAGCCAAGAGTGTTGCGGATATCCGTCACTGATCCAGACGCCACGGACTCCTCCGGCGACGAAGAAGGAAACTGCTTAAACCGCCGGAGAATGAAGCGCTATGTCAACCGGATTGAAATCGAAACCACCACCTCCAAAAAAGTCGCCAACTCCGCCGCCGCCGTCATCCCGAATCCCAGGAAAAGGCTCACCGGCGAGCCCTCCTCTAGCCGGAGGCCGGCGAAGCTTCCGGCGACGAACAACGGAAGGAAGTTCCGCGGCGTACGGCAGAGACCTTGGGGGAAATGGGCGGCGGAGATTCGAGATCCGGCACGGAGGGTGCGGGTCTGGTTGGGTACCTTTGACACTGCAGAAGAAGCTGCTATGGTCTACGACAATGCAGCGATTAAGCTTCGAGGCCCTGATGCTTTGACGAACTTCGTCACGCCACCGGCGCAGAAAGAAAAGCCACCGCAGGAGGAGGCGGATGTGACTGCCGTGAAACCACAAATGAAGGTGGTTGTGAATGCTGAAGCTTCAAGCTCCAGCTACAATTCGGGCGATTATCAGTGTCTCAACCTTTCGTCTCCCACATCGGTGCTTCATTTCAGGAGCAACCCGAGCGAGGAAATCGCGGAATCTCAAAAACCGGTCGAACCGGAAGAAGCAAGTGAGGCTGAGGAAGTGTGTCAAGTTTTCAGAGAGTGCCAAGGCGAGACAAGTTTGTTCGATGAGACAGGGGAGTTTTTCCAACCGGATATGCCTATGTGGGACGATGTTTTCAATTTCCAAACTTTCGAGTACCCTTTGCTCTTCGAAGAAGAACCGCCCCAGATGTTGGGCGAAACGACGCCGGATGGTGATGATGATGACGATGATTTCAGTTACAATATCACTCTGGCTGATTCTCTCATAGATTTTGAGAAAGCGTGTCCTCCATCAACGTCGTGCCAAGTGGACGATTACTTCCAAGACATTTTGTCAGGCTCAGATCCTCTGGTCGTGCTCTGA 1098 0.5273 MMEQSSILCKYTVHHNVTKKLVSPKKKASDAKSHPIEPRVLRISVTDPDATDSSGDEEGNCLNRRRMKRYVNRIEIETTTSKKVANSAAAVIPNPRKRLTGEPSSSRRPAKLPATNNGRKFRGVRQRPWGKWAAEIRDPARRVRVWLGTFDTAEEAAMVYDNAAIKLRGPDALTNFVTPPAQKEKPPQEEADVTAVKPQMKVVVNAEASSSSYNSGDYQCLNLSSPTSVLHFRSNPSEEIAESQKPVEPEEASEAEEVCQVFRECQGETSLFDETGEFFQPDMPMWDDVFNFQTFEYPLLFEEEPPQMLGETTPDGDDDDDDFSYNITLADSLIDFEKACPPSTSCQVDDYFQDILSGSDPLVVL 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4719g00014 365 Gene3D AP2/ERF domain 119 178 IPR036955 GO:0003700|GO:0006355
Gabi4719g00014 365 Pfam AP2 domain 120 169 IPR001471 GO:0003700|GO:0006355
Gabi4719g00014 365 SMART rav1_2 120 183 IPR001471 GO:0003700|GO:0006355
Gabi4719g00014 365 MobiDBLite consensus disorder prediction 84 121 - -
Gabi4719g00014 365 SUPERFAMILY DNA-binding domain 120 177 IPR016177 GO:0003677
Gabi4719g00014 365 CDD AP2 120 176 IPR001471 GO:0003700|GO:0006355
Gabi4719g00014 365 ProSiteProfiles AP2/ERF domain profile. 120 177 IPR001471 GO:0003700|GO:0006355
Gabi4719g00014 365 FunFam Ethylene-responsive transcription factor 2 119 178 - -
Gabi4719g00014 365 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 38 264 - -
Gabi4719g00014 365 PRINTS Ethylene responsive element binding protein signature 121 132 IPR001471 GO:0003700|GO:0006355
Gabi4719g00014 365 PRINTS Ethylene responsive element binding protein signature 143 159 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4719g00014 Gabi-Chr4719 197034 198700 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4719g00014 9 291 AP2-EREBP Transcription Factor Family AT4G27950 44.056 7.06e-55 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gabi4719g00014 AP2 3.1e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4719g00014 - - gmx:100807598 373.244