Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4719g00005 ATGGACAACATGGGAGATCAAAAGAGCCTCATACATGAGCTACTACAAGGTTTGGAGTTGGCAAGACAGCTCCAAATCTATCTTCACGTGCCTTCTTCTTCCCAAGAAACCCGTGAGCTGTTGATCCAAAAGATCATATCCACATTTGAGAAGGCACTTGAAATGGTAAATTGGAAAGGGCCAGTGGGTGAATCATCACAACATCCTTCAGGTGTTGTAATTCGAAAGTCAGATTCACCACCTTTGAGCAGCAGTCCCCGCAGTGAAGACTCTGACAGAGATTTGAAGGACCAGGAATCGAATGCTTCCACAAAGAGAAACACTTTCCCAAGATGGACAAAACATATTCGAGTTAACCCAGGAATGGGAGTTGAAGGGCCTCTTGATGATGGATATAGTTGGAGAAAATATGGCCAGAAAGACATTCTTGGAGCCATGTATCCAAGAGGCTATTATAGATGCACTCACAGAAATGTTCAAGGTTGCTTGGCCACAAAGCAAGTACAAAGATCTGATGAAGACCCCACTGTCTTCGAAATCAATTACCGAGGAAAGCATACTTGCACAATGGCCTCCAATGTGGTTCCTACATCAACTCCACTAGAAAACCAAGAATCAAATTTGAACACAAATCCTCTTCAACAGCATCAGAATGTTCTGCAAAGCCTTGAGGAGCAACCAAACGAGCTACTTTTGAACCTCAGGGCAGGCCTTAAAGTCCAAACAGAGAACCTTGATTCCACTGACCAATCATTTTCACCTTTCCATTTCCCTTCAACTTCAAGCATAAAAATTGAAGACCAAGTTTTCCCGTCCCCTATGGTTGGAAACAGCTTTGCTGAAAACTTGAATTCCCCTTCGTACATATCCCCTGCTACATCAGGAATAAGCCACTTTTCGGTGTCTCCAAGTGGGGTTAACAGCTTTGGGGGGCACCCAAATTTGGCAAGTTCTGGGTCTCATATCAATGACATGATCCCTGCTGCTACTTCAGCTGCAAACTCACCAACCGTTGGTTTGGAGTTTCCATTTGACCAGTTTGAATTTGATGGTCAGAACTTCACATTCCATAACCCACGATTTTTCTCGTGA 1092 0.4377 MDNMGDQKSLIHELLQGLELARQLQIYLHVPSSSQETRELLIQKIISTFEKALEMVNWKGPVGESSQHPSGVVIRKSDSPPLSSSPRSEDSDRDLKDQESNASTKRNTFPRWTKHIRVNPGMGVEGPLDDGYSWRKYGQKDILGAMYPRGYYRCTHRNVQGCLATKQVQRSDEDPTVFEINYRGKHTCTMASNVVPTSTPLENQESNLNTNPLQQHQNVLQSLEEQPNELLLNLRAGLKVQTENLDSTDQSFSPFHFPSTSSIKIEDQVFPSPMVGNSFAENLNSPSYISPATSGISHFSVSPSGVNSFGGHPNLASSGSHINDMIPAATSAANSPTVGLEFPFDQFEFDGQNFTFHNPRFFS 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4719g00005 363 Pfam WRKY DNA -binding domain 129 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi4719g00005 363 SUPERFAMILY WRKY DNA-binding domain 127 190 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi4719g00005 363 MobiDBLite consensus disorder prediction 60 114 - -
Gabi4719g00005 363 FunFam WRKY transcription factor 53 114 191 - -
Gabi4719g00005 363 MobiDBLite consensus disorder prediction 87 101 - -
Gabi4719g00005 363 MobiDBLite consensus disorder prediction 70 86 - -
Gabi4719g00005 363 ProSiteProfiles WRKY domain profile. 123 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi4719g00005 363 SMART WRKY_cls 128 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi4719g00005 363 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 5 307 IPR044810 GO:0003700
Gabi4719g00005 363 Gene3D WRKY domain 122 191 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4719g00005 Gabi-Chr4719 73566 75400 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4719g00005 6 260 WRKY Transcription Factor Family AT4G23810 37.722 9.11e-53 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi4719g00005 WRKY 5.2e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4719g00005 - - gmx:100776906 531.561