Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4718g00008 ATGTCTCAACTTGCTCAGCAAGAGAATAATGCAAATGCAGCGATGACTCAGTGGACTAGGGAAGACGACATTGCCTTTGAAAACGCCCTCGCTATCATCCCAAAAGCCATGCCTGAGCCAGAGTATTGGGAGAAAGTAGCCGCTCTTGTCCCTGGAAAATCACCGGCGGAGGTCCAAAATTATTACTGGGTATTGGTCCATGGCTTGTTAGAGATTGAGACGGGTCGAGTGCCGTTACCGCACTTGTTGCCGGTGCTGATGGAGGCCGACGGAGGTAACTATGGAAAGAAAAGGTTGACATGGACAGAAGAGGAACACGGGTATGTTTGTGTTATTTCTCGCTGGGCTGCAGATAAATGGCAAGGGAGATTGGAAAAACATTGTTAG 387 0.4858 MSQLAQQENNANAAMTQWTREDDIAFENALAIIPKAMPEPEYWEKVAALVPGKSPAEVQNYYWVLVHGLLEIETGRVPLPHLLPVLMEADGGNYGKKRLTWTEEEHGYVCVISRWAADKWQGRLEKHC 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4718g00008 128 SUPERFAMILY Homeodomain-like 6 74 IPR009057 -
Gabi4718g00008 128 FunFam Transcription factor SRM1 10 79 - -
Gabi4718g00008 128 Pfam Myb-like DNA-binding domain 17 62 IPR001005 -
Gabi4718g00008 128 ProSiteProfiles Myb-like domain profile. 10 66 IPR001005 -
Gabi4718g00008 128 Gene3D - 16 67 - -
Gabi4718g00008 128 CDD SANT 18 66 IPR001005 -
Gabi4718g00008 128 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 10 94 IPR044636 GO:0003700
Gabi4718g00008 128 SMART sant 14 68 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4718g00008 Gabi-Chr4718 70161 71368 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gabi4718g00008 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4718g00008 - - mcha:111006345 84.3445