Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4718g00002 ATGGCATCAAGCTCAATGTCAGCCTCTGGTTCATGGAGTGCTAAGGACAATAAAGCCTTTGAAAGGGCTCTAGCTGTTTATGACAAGGACACCCCAGACCGTTGGTACAATGTTGCAAATGCTGTTGGTGGGAAAACTCCAGATGAAGTGAAGAGGCACTATGAGCTCCTTGTTCAGGATGTTAAGCATATTGAGTCAGGACAAGTGCCATTCCCAAATTACAGGAAAAGTGGAGTGTCTGAGGAGGAGAAAAGGCTGAGGAACCTGAAGCTCCAGTAA 279 0.4624 MASSSMSASGSWSAKDNKAFERALAVYDKDTPDRWYNVANAVGGKTPDEVKRHYELLVQDVKHIESGQVPFPNYRKSGVSEEEKRLRNLKLQ 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4718g00002 92 CDD SANT 18 58 IPR001005 -
Gabi4718g00002 92 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 84 IPR044636 GO:0003700
Gabi4718g00002 92 ProSiteProfiles Myb-like domain profile. 4 58 IPR001005 -
Gabi4718g00002 92 ProSiteProfiles SANT domain profile. 7 62 IPR017884 -
Gabi4718g00002 92 SUPERFAMILY Homeodomain-like 10 66 IPR009057 -
Gabi4718g00002 92 Gene3D - 2 71 - -
Gabi4718g00002 92 FunFam Transcription factor SRM1 4 71 - -
Gabi4718g00002 92 SMART sant 8 60 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4718g00002 Gabi-Chr4718 23628 24510 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gabi4718g00002 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4718g00002 - - gmx:100818368 157.147