Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4709g00002 ATGGCGAATCTTTTCTGGGTTGGCATTGTAATAGGACTTGTTTTTAGCAACTGGGTTGATGGCTTTGCAGCTTACCATTATCCTCACCTCAATGAAACTGAGTTTTCTTTGTTGGATGCTCATGAAGCATCCTTATCCTTGGTTGGGAGGAACCCTCTCATGGTAGGACTCACCCTTATTCCAAGTGCTGGTGCTAAAGGAGCAGTTTGCTTGGATGGAACATTGCCTGGTTATCATTTGCATCGGGGATATGGATCGGGAGCAAACAGCTGGCTCGTTAATCTAGAGGGAGGTGGATGGTGTAATAACGTCGGAACATGCGTTTATCGCAAGAAAACACGGCGTGGATCATCAACATTCATGGAAAAGGAGATACCTTTTACGGGAATATTAAGCAATAATGCTCAAGATAATCCAGATTTTTTCAATTGGAACAGAGTTAAAATTCGCTATTGTGATGGTGCCTCTTTTACCGGGGATGGTGAAGATAAGGGTGCGCAACTGCAATTCAGAGGGCAACGTATTTGGTTGGCTGCAATGGAGGATTTGATGTCAAAGGGAATGCGTTTTGCCAAGCAGGCACTTCTTTCTGGATGCTCGGCTGGTGGTTTGGCTACTATTATACACTGTGATGAATTTCGAGGACTATTCCGAAGAACCACCAAAGTGAAGTGTCTTAGTGATGCTGGGTTATTTCTTGATGCGATTGATGTATCTGGTGGGCATACCCTCAGGAATTTTTTCAGTGGTATTGTAAGGTTGCAGGGAGCGCAGAAGAATCTGCCGCACAGTTGTTCTAATCACCTTGATCCCACTTCGTGCTTCTTCCCTCAGAACTTAATTGCCAGTATCAGAACCCCACTATTCATTCTTAATACCGCCTATGATTCATGGCAGCTCCAGTCAAGCTTAGCTCCTCCATCGGCAGATCCCCATGGCTATTGGCATGATTGTAGATTAAACCATGCTAGATGTACTAGTTCACAAATCCAATTTCTGCAAGGATTCAGGAATCAAATGCTGAATGCTGTTAGAGGTTTCTCAAGAGCAAATCAGAATGGATTGTTCATAAATTCATGTTTTGCTCACTGCCAAAGTGAGAGGCAAGATACATGGTTTGCTGACAATTCTCCTGTCATTGGGAACAAGGCAATTGCTCTGGCTGTTGGAGACTGGTATTTCGACCGAGCAGTTATTAAGGATGTTGATTGTCCTTACCCTTGTGATAATACATGCCACCACCTGGTTTTTAGATGA 1257 0.4375 MANLFWVGIVIGLVFSNWVDGFAAYHYPHLNETEFSLLDAHEASLSLVGRNPLMVGLTLIPSAGAKGAVCLDGTLPGYHLHRGYGSGANSWLVNLEGGGWCNNVGTCVYRKKTRRGSSTFMEKEIPFTGILSNNAQDNPDFFNWNRVKIRYCDGASFTGDGEDKGAQLQFRGQRIWLAAMEDLMSKGMRFAKQALLSGCSAGGLATIIHCDEFRGLFRRTTKVKCLSDAGLFLDAIDVSGGHTLRNFFSGIVRLQGAQKNLPHSCSNHLDPTSCFFPQNLIASIRTPLFILNTAYDSWQLQSSLAPPSADPHGYWHDCRLNHARCTSSQIQFLQGFRNQMLNAVRGFSRANQNGLFINSCFAHCQSERQDTWFADNSPVIGNKAIALAVGDWYFDRAVIKDVDCPYPCDNTCHHLVFR 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4709g00002 418 PANTHER NOTUM-RELATED 51 414 IPR004963 GO:0016787
Gabi4709g00002 418 Pfam Pectinacetylesterase 51 397 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4709g00002 Gabi-Chr4709 25883 31299 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4709g00002 54 418 Carbohydrate Esterase AT1G57590 73.699 0.0 591
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4709g00002 K19882 - gmx:100810716 771.926