Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4702g00004 ATGAAGATAATAATTCTAATCTTTTTCTTTATACTTCCCGTGGCATTTGCAGAACTGCAGGTTGGATTCTATGGCTCCACATGCCCAAAAGCAGAGTCAATTGTGCAGCAAGTGGTGCAAAACCGATTCAATCGTGACAAATCCATAACAGCAGCCTTACTTCGCATGCATTTTCATGATTGTTTTGTTAGGGGTTGTGATGCATCCATACTCATAGACTCAACCAAGAATAACACATCAGAGAAAAATACAACTGCAAACGCTACCGTTAGAGGATATGATCTGATTGATGAGGTGAAGGAAAGCCTTGAAGCTACATGTCCTTCAACAGTGTCGTGTGCAGATATCATAACATTAGCAACAAGAGATGCTGTTGCCTTATCTGGAGGATCCAAATACGTTGTTCCCACAGGAAGACATGATGGATTAGTCTCTAACAGTAATGAAGTTGATTTGCCAGGACCCTCCACTCCTGTGCCATTAGCATCACAAATTTTTGCAAAAAAGGGCATAACAACAGAGGAAATGGTGACCCTTTTGGGTGCACATACAGTTGGTGTTGCACACTGCAATTTTTTTTCTAATAGACTTGGTAGGGTTCCTGACCCTTCAATGGACCCTGCCTTAGAAGCTAAGCTTGCTAAGTTATGTAACTCTACTTTGAGCGATGACCCTGCTGCATTTTTGGATCAGAAGACACCTTTTCTTGTTGATAACCAGTTCTACAAACAGGTTCTTGTTAAAAGGGGTATATTGCAGATTGATCAACAACTTGCCTTGGATACAACTACAAAGGATTTTGTGTCAGGTTTTGCATCCAATAATAATAAGTTCCAAAAGAGTTTTGCAAATGCAATGATAAAGATGGGAAAGATTGAAGTTCTGGTTGGAGATGAAGGAGAAATTCGCAAGAATTGCAGGGTTTTCAACTAA 933 0.4009 MKIIILIFFFILPVAFAELQVGFYGSTCPKAESIVQQVVQNRFNRDKSITAALLRMHFHDCFVRGCDASILIDSTKNNTSEKNTTANATVRGYDLIDEVKESLEATCPSTVSCADIITLATRDAVALSGGSKYVVPTGRHDGLVSNSNEVDLPGPSTPVPLASQIFAKKGITTEEMVTLLGAHTVGVAHCNFFSNRLGRVPDPSMDPALEAKLAKLCNSTLSDDPAAFLDQKTPFLVDNQFYKQVLVKRGILQIDQQLALDTTTKDFVSGFASNNNKFQKSFANAMIKMGKIEVLVGDEGEIRKNCRVFN 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4702g00004 310 PRINTS Plant peroxidase signature 52 72 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4702g00004 310 PRINTS Plant peroxidase signature 174 186 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4702g00004 310 PRINTS Plant peroxidase signature 28 47 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4702g00004 310 PRINTS Plant peroxidase signature 91 104 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4702g00004 310 PRINTS Plant peroxidase signature 228 243 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4702g00004 310 PRINTS Plant peroxidase signature 110 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4702g00004 310 PRINTS Plant peroxidase signature 129 144 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4702g00004 310 PRINTS Plant peroxidase signature 244 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4702g00004 310 PRINTS Plant peroxidase signature 284 297 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4702g00004 310 Gene3D - 22 310 - -
Gabi4702g00004 310 CDD secretory_peroxidase 18 309 IPR033905 GO:0004601|GO:0042744
Gabi4702g00004 310 FunFam Peroxidase 22 154 - -
Gabi4702g00004 310 SUPERFAMILY Heme-dependent peroxidases 18 310 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gabi4702g00004 310 ProSiteProfiles Plant heme peroxidase family profile. 18 310 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4702g00004 310 ProSitePatterns Peroxidases proximal heme-ligand signature. 175 185 IPR019793 -
Gabi4702g00004 310 ProSitePatterns Peroxidases active site signature. 50 61 IPR019794 GO:0004601
Gabi4702g00004 310 FunFam Peroxidase 153 289 - -
Gabi4702g00004 310 PRINTS Haem peroxidase superfamily signature 111 128 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4702g00004 310 PRINTS Haem peroxidase superfamily signature 175 190 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4702g00004 310 PRINTS Haem peroxidase superfamily signature 230 245 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4702g00004 310 PRINTS Haem peroxidase superfamily signature 50 64 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4702g00004 310 PRINTS Haem peroxidase superfamily signature 129 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4702g00004 310 Gene3D Peroxidase, domain 2 153 289 - -
Gabi4702g00004 310 PANTHER - 4 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4702g00004 310 Pfam Peroxidase 35 274 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4702g00004 Gabi-Chr4702 64701 65756 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4702g00004 1 310 Peroxidase AT4G26010 58.280 6.49e-134 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4702g00004 K00430 - gmx:100777946 449.129