Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4701g00070 ATGGAGATGCAGGACCAAGTAGAAGGCACAGGGTCAACCATAGTTGGTACAGCTAGTAACTGCCATTCCAATGGTGGAACACAATCTGAAAATGTTGCACAATTGCAGGATATACCTTCTGTTGGAAACAGACATACTCCCAAGGTGAGGAAGCCATATACCATTACTAAACAAAGGGAGAAGTGGACTGAGGAAGAGCATCAAAAGTTCCTTGAAGCTTTGAAATTGTATGGACGTGGCTGGCGTCAAATCGAAGAGCATATAGGTACCAAAACTGCAGTTCAGATTCGAAGCCATGCTCAAAAGTTTTTCTCTAAGGTTGTGCGGGAATCTGATGGCAGTGTTGAAAGTTCTATACAGCCAATGGACATACCTCCTCCTCGGCCGAAGAGGAAACCTCTTCATCCATATCCCCGTAAATCAGTTGACTCTTTGAAAGGACACTCCACACCAAATGAACCAGAAATATCTCCATCTACAAACCAGTTTGTTGCAGAGAAAGACACCCAGTCTCCAACCTCAGTGCTATCTGCAATAGGTTCGGAAGCATATGGGTCTGCAAATTCGGAGCAAACTAACAGATGCCTTTCACCAAATTCTTGCACCACTGATTGCATGACATCCAAACCATCTGAGGAGGAAGAGAAGGGATCTCTAGCTTCAGTCCCTTTATCCGCAGGTTCAAACCCAAGCATGTGCATGAAGTCCGAGTTTAGTTCCAAGCAAACTGAATGTTTCAAAGAAGATGCTGCCAACATGCCTCACATAAATAGTATTAAGCTTTTTGGGAGAACTGTCTCTATGGTAGGTAATCAGAAGTCACTGAAGATAGATGATGAGAATATTAAGCCAAAAACTATGAAGTCTGATGAAGTGGATGTTGTTGAGAATGAAAAGCTTGGCCAAGCAGGGGCATCTGAGAAACTAGAAACACAATTATCACTGGGAATGTGTAGTGATAACTGGCATATAACACCTGATGGAGCTAAAATGACCAGCAGGGAACACCCGAAAGAGAACATGTGCTTCAGTGAATGTGCAACTGAAGCATCTCAGCCATGGTGGAGTTTGTACCAAGGCCTTCCAGCTTTCTACCTCGGGCCATGTAATCAAATCCTGAATCCCATGCCTCTTTGTCCCTCTTTGAATGTAAGAACAAGAGAGGAGGAAAGTTCTTGCACTAATTCTAATACTGAATCAGTTTGTGATATGGTAAATCCAAGCAAGAACTCAGATGCTGTTGATTCTAAATGTCAAAAATATCATGAGGAAGGAATAGCCCCCCAGAAGCCTGCAAGGGGATTTGTACCATATAAAAGGTGTTTAACTGAAAGAGATGCAAATTCTTTAATTGTTGCCTTTGCCTTGGATGAGAGGGAGGGGCAAAGAGCTCGTTTGTGCTCATAG 1407 0.4307 MEMQDQVEGTGSTIVGTASNCHSNGGTQSENVAQLQDIPSVGNRHTPKVRKPYTITKQREKWTEEEHQKFLEALKLYGRGWRQIEEHIGTKTAVQIRSHAQKFFSKVVRESDGSVESSIQPMDIPPPRPKRKPLHPYPRKSVDSLKGHSTPNEPEISPSTNQFVAEKDTQSPTSVLSAIGSEAYGSANSEQTNRCLSPNSCTTDCMTSKPSEEEEKGSLASVPLSAGSNPSMCMKSEFSSKQTECFKEDAANMPHINSIKLFGRTVSMVGNQKSLKIDDENIKPKTMKSDEVDVVENEKLGQAGASEKLETQLSLGMCSDNWHITPDGAKMTSREHPKENMCFSECATEASQPWWSLYQGLPAFYLGPCNQILNPMPLCPSLNVRTREEESSCTNSNTESVCDMVNPSKNSDAVDSKCQKYHEEGIAPQKPARGFVPYKRCLTERDANSLIVAFALDEREGQRARLCS 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4701g00070 468 CDD SANT 61 104 IPR001005 -
Gabi4701g00070 468 ProSiteProfiles Myb-like domain profile. 54 104 IPR001005 -
Gabi4701g00070 468 SMART sant 58 106 IPR001005 -
Gabi4701g00070 468 MobiDBLite consensus disorder prediction 109 224 - -
Gabi4701g00070 468 NCBIfam myb-like DNA-binding domain, SHAQKYF class 57 106 IPR006447 GO:0003677
Gabi4701g00070 468 Gene3D - 61 108 - -
Gabi4701g00070 468 PANTHER SWI/SNF COMPLEX-RELATED 23 294 - -
Gabi4701g00070 468 FunFam protein REVEILLE 6 isoform X1 61 109 - -
Gabi4701g00070 468 SUPERFAMILY Homeodomain-like 53 107 IPR009057 -
Gabi4701g00070 468 ProSiteProfiles SANT domain profile. 57 108 IPR017884 -
Gabi4701g00070 468 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 54 108 IPR017930 -
Gabi4701g00070 468 MobiDBLite consensus disorder prediction 145 207 - -
Gabi4701g00070 468 Pfam Myb-like DNA-binding domain 59 102 IPR001005 -
Gabi4701g00070 468 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4701g00070 Gabi-Chr4701 832361 836058 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gabi4701g00070 Myb_DNA-binding 1.6e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4701g00070 - - gmx:778089 694.115