Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4701g00066 ATGTCACCGGTTGGATTACCACCTGGTTTTAGGTTTCATCCAACTGATGAAGAACTTGTCAACTATTATCTCAAGAGGAAGATCAATGGCCAAGAAATTGAACTTGATATCATTCCTGAGGTTGATCTCTACAAATGTGAACCATGGGAATTAGCAGAGAAATCATTTTTGCCAAGTAGAGACCCAGAGTGGTACTTCTTTGGACCAAGGGATAGGAAATACCCCAATGGGTTCAGAACAAATAGAGCAACTAGAGCAGGGTACTGGAAATCTACTGGGAAAGATAGAAGAGTTTCATGCCAAAGCAAACCTATTGGTATGAAGAAGACTTTGGTTTACTACAGAGGCAGAGCTCCTCAAGGAATCAGAACTGACTGGGTAATGCATGAATATCGCCTTGATGATAAAGAGTGTGAAGACGCCTCTGGATTACAGGATACTTATGCATTGTGCCGTGTGTTCAAGAAAAATGGAATCTGCTCTGATATTGAAGAACAAGGGCAATGTAGTTTGTCACTAATTGAAAGCTCCCAAACCATAATTAATGAGTGTGAAACCATGTCTCCGGATATACCAGGGGCATCATCTTCTTGTTTGGAAGAGGAAGACAAAGATGATTCATGGATGCAGTTCATTACAGAGGATGCATGGTATTCTAATACAGCAATGGCTGGTGGTGAAGAAGTCTCACATGTTACATTTACTAACTAA 711 0.4065 MSPVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVSCQSKPIGMKKTLVYYRGRAPQGIRTDWVMHEYRLDDKECEDASGLQDTYALCRVFKKNGICSDIEEQGQCSLSLIESSQTIINECETMSPDIPGASSSCLEEEDKDDSWMQFITEDAWYSNTAMAGGEEVSHVTFTN 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4701g00066 236 FunFam Nac domain-containing protein 86 15 159 - -
Gabi4701g00066 236 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Gabi4701g00066 236 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
Gabi4701g00066 236 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 178 - -
Gabi4701g00066 236 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Gabi4701g00066 236 Gene3D NAC domain 15 159 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4701g00066 Gabi-Chr4701 818996 822260 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4701g00066 1 229 NAC Transcription Factor Family AT3G17730 74.390 3.62e-132 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gabi4701g00066 NAM 9.4e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4701g00066 - - gmx:100784495 486.493