Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4701g00053 ATGAACGGAAAAGCCTCTGTCTCCAAGGAGCTCCATGCCAAGCACACCAAGATCTTAGAGGGACTTCTTAAGCTGCCTGACAATAGGGAATGTGCAGATTGCAGGAACAAGGCACCACGATGGGCCAGTGTGAACTTAGGAATTTTCATTTGCATGCAATGTTCCGGAATTCACCGGAGTCTTGGAGTGCATATATCAAAGGTGCGGTCCACAACTTTGGATACATGGTTGCCAGATCAAGTTTCTTTCATGCAATTTATGGGTAATGCCAAGTCAAATATGTACTGGGAGGCAGAACTGCCGCCAAATTTTGACAGAAATGGATATGGAATTGAAAAGTTTATTCGTGCCAAGTATGTGGAGAAAAGATGGGCTTCAAAAGGTGGCCCACAAGCAGCTTCAAAGTCAGCTGAAATAATCTTTAATGTGAATGATTCACCAAATGTTGTGGCCAAGAGTAGTATTCAAAAGAATAGGAGATTGTCTCTTGAGGAAAGCATTCTTGTGAACCACATGGCAAAAATCCGGCCTCCAGTAGCAAGATCTCATGAGGTATTCATGTTTTATATGAAGTTCAATCCCTGA 585 0.4274 MNGKASVSKELHAKHTKILEGLLKLPDNRECADCRNKAPRWASVNLGIFICMQCSGIHRSLGVHISKVRSTTLDTWLPDQVSFMQFMGNAKSNMYWEAELPPNFDRNGYGIEKFIRAKYVEKRWASKGGPQAASKSAEIIFNVNDSPNVVAKSSIQKNRRLSLEESILVNHMAKIRPPVARSHEVFMFYMKFNP 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4701g00053 194 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 1 183 IPR044520 GO:0005096
Gabi4701g00053 194 FunFam stromal membrane-associated protein 1 isoform X1 1 129 - -
Gabi4701g00053 194 SUPERFAMILY ArfGap/RecO-like zinc finger 15 126 IPR037278 -
Gabi4701g00053 194 PRINTS HIV Rev interacting protein signature 68 89 IPR001164 GO:0005096
Gabi4701g00053 194 PRINTS HIV Rev interacting protein signature 28 47 IPR001164 GO:0005096
Gabi4701g00053 194 PRINTS HIV Rev interacting protein signature 47 64 IPR001164 GO:0005096
Gabi4701g00053 194 Gene3D Arf GTPase activating protein 2 130 IPR038508 -
Gabi4701g00053 194 CDD ArfGap 19 119 - -
Gabi4701g00053 194 ProSiteProfiles ARF GTPase-activating proteins domain profile. 16 132 IPR001164 GO:0005096
Gabi4701g00053 194 SMART arf_gap_3 5 132 IPR001164 GO:0005096
Gabi4701g00053 194 Pfam Putative GTPase activating protein for Arf 17 127 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4701g00053 Gabi-Chr4701 564438 566226 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4701g00053 19 119 C2H2 Transcription Factor Family AT4G05330 51.402 6.37e-30 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4701g00053 K12486 - gmx:100816853 348.977