Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4701g00047 ATGACTGTGTTGGTGAATTGTGGTGCGGGGTTTAATAAAAAGGTTTCTCCCATTGAGTATGAAACAGAGGCGTCACAACGTCTCGTAGATGCTGCAAATTACGGGGACACAGACTCTGCCTTCGCATGTGTCGCGAATCACTTTGTGGACGTGAACTTCGTCGGAACGGTGTCGTTGAAGTCCAAAACGACGGAGATCGTGCTGCAAGACGGGTTGCCTCACCAAGTTCTGTTTGGGTACGAGGAGTTCAAAACCGAGGTCACTGCTCTGTTCTTGGCTGCGCATAATGGGAATTTGACACTCCTCCGCAAGCTATTGCGTGCTGGAGCTAGTGTAAATATGAAATTGTTCCGGGGCTATGCCACAACAGCTTCAGTGAGGGAAGGCCATCTAAAAGTATTGGAAGTCCTTATCAATAATGGGGCATCACAAATTGCATGTGAGGAGGCTTTAATGGAATCAAGCCACTTTGGACGGCCCAGATTTGCTAAACTACTCATGCAGTCTGACATGATCCGTCCTGAAGTTGCAGTTCATGCCCTTGTATCTGCTTGTTGCAGAGGCTTCATTGAGGTTGTTGATGTACTCATCAAGCACGGAGTGGATGTCAATGCAATTGATAGAATTTTGCTTCAATCTTCAAAGCCATTTCTTTACGCTAATGTTGATTGCAATGCATTATTTGCTGCCGTTGTCAGCAGACAGATTAATGTTGTCAGATTACTCTTGCAGGTTGGGGTAAGGCGTGATATCAAGGTGAAACTGGGGGCATGGTCATGGGAAACGGATACAGGAGAAGAATCTCGTGTAGGTGTTGGACTAGCTGAGGCTTATCCAATCACGTGGTGTGCTGTGGAGTATTTTGAATCCACAGGTTCCATATTGCAAATGCTACGCTGCCCCTGCTCGCTTAATAGTTGGCATATTGGGAGGACTCTCTTGCACCATGCCATCGTTTGTGACAATGAAAAAGCCGTAACTATACTTCTAAATAGTGGTGAATTTACTGAATTGGCAGTGCAAACTACTGAAGAAACCAATGTACACCCTATTCACATGGCTGCAAGGTTTGGATCATGTAACATTCTTAAAAGCCTAATTAATGCTGGTTGTAACTTGGACTCCCAAACAAAATCTGGAGATACAGCATTGATGATCTGCATAAGGTATAAACATGAGGAGTGCCTTAAAGTCCTAGCATCAGCAGGTGCTGATTTGGGATTGGTAAATTCATTTGGTCAATGTGCAACTTCAATTGCAAACTCTCTTCAGTGGACTGAAGTCTTCCATGAAGTAATTTTGGATGTTATCAGAGCCAGAAAGGTTGTTAAATCAAGCAATGCTTCTAGATTTTCTACTTTGTTATTTGTAACTCATGCAAATAATATAAAGGGTTTGAAGAAACTCATTGTAAACAAGAACTTTGATATAGATGAGCAAAACAGCAATGGATTTTCAGCTGCAATGATAGCTGTTGCAGATGGTAGTGTAGAGGCTTTCAAGTTGCTTCTTTATGCTGGTGCTGATGTAGCTAAGCTTAAAAACAAGAATGGTTTGACAGCACTTGATCTCATAGAAGTGAACCCAAATGGGGAAGTGTTTCACAAGGTGATAATTGAATATGCAATGAAAAAGGGACGCAATGGTTCCATTGAGATGAAACCTCTCCACATTGCAGCTCGCTATGGGGACATAGATAGTGCTCATAAACTATTAAATGAAGGGTACGATGTTAATGCTTTGGATGGACATGGATATACCCCATTGATGTTAGCGGCAAGAGGATGCCATGTTGATATGTGTAAGCTTTTGATCTCACATGATGCCAAATGTTATATTGAGAATGAGAAACATGAGACAGCACTTTCACTTGCTAGAGAAAATGGTAGAGGAAATGATGCTGAGCGTGTGATAATGGATGAGCAAGCTCGAAGATTAGTGTTGTATGGGGCTAATGTGATGAAGCATACAAAGTGTGGTAAAGGGTCACCTCATAGCAAGGTACTGGTAATGGTGGAGGATGCTGGAATTCTAAAATGGGGGAAATCAAACAAGAGAAAAGTGGTTTGTAAAGAGGCTGTGGTTGGAGCAAGTAAAAGTTTTCGATGGAACCGCAGAAAAAAGTTTGATGTTGATGACCCAGGAATGTTCCATGTAATAACTACAGAAGGTAAGCAGTTTCATTTTGTATGTGAAGGTGGGATTGAAATGGCTGAGATATGGGTAAGGGGGATTAGATTAGTGACAACAGAAGCTATTTTTGGCAGAAAAAGCTGA 2277 0.4216 MTVLVNCGAGFNKKVSPIEYETEASQRLVDAANYGDTDSAFACVANHFVDVNFVGTVSLKSKTTEIVLQDGLPHQVLFGYEEFKTEVTALFLAAHNGNLTLLRKLLRAGASVNMKLFRGYATTASVREGHLKVLEVLINNGASQIACEEALMESSHFGRPRFAKLLMQSDMIRPEVAVHALVSACCRGFIEVVDVLIKHGVDVNAIDRILLQSSKPFLYANVDCNALFAAVVSRQINVVRLLLQVGVRRDIKVKLGAWSWETDTGEESRVGVGLAEAYPITWCAVEYFESTGSILQMLRCPCSLNSWHIGRTLLHHAIVCDNEKAVTILLNSGEFTELAVQTTEETNVHPIHMAARFGSCNILKSLINAGCNLDSQTKSGDTALMICIRYKHEECLKVLASAGADLGLVNSFGQCATSIANSLQWTEVFHEVILDVIRARKVVKSSNASRFSTLLFVTHANNIKGLKKLIVNKNFDIDEQNSNGFSAAMIAVADGSVEAFKLLLYAGADVAKLKNKNGLTALDLIEVNPNGEVFHKVIIEYAMKKGRNGSIEMKPLHIAARYGDIDSAHKLLNEGYDVNALDGHGYTPLMLAARGCHVDMCKLLISHDAKCYIENEKHETALSLARENGRGNDAERVIMDEQARRLVLYGANVMKHTKCGKGSPHSKVLVMVEDAGILKWGKSNKRKVVCKEAVVGASKSFRWNRRKKFDVDDPGMFHVITTEGKQFHFVCEGGIEMAEIWVRGIRLVTTEAIFGRKS 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4701g00047 758 Gene3D - 540 692 IPR036770 -
Gabi4701g00047 758 ProSiteProfiles Ankyrin repeat region circular profile. 483 510 - -
Gabi4701g00047 758 ProSiteProfiles Ankyrin repeat region circular profile. 551 582 - -
Gabi4701g00047 758 ProSiteProfiles Ankyrin repeat profile. 551 583 IPR002110 GO:0005515
Gabi4701g00047 758 SUPERFAMILY Ankyrin repeat 310 637 IPR036770 -
Gabi4701g00047 758 Gene3D - 170 262 IPR036770 -
Gabi4701g00047 758 ProSiteProfiles Ankyrin repeat profile. 379 411 IPR002110 GO:0005515
Gabi4701g00047 758 ProSiteProfiles Ankyrin repeat profile. 180 208 IPR002110 GO:0005515
Gabi4701g00047 758 ProSiteProfiles Ankyrin repeat profile. 584 616 IPR002110 GO:0005515
Gabi4701g00047 758 Gene3D - 11 169 IPR036770 -
Gabi4701g00047 758 PANTHER ANKYRIN REPEAT-CONTAINING 17 734 - -
Gabi4701g00047 758 ProSiteProfiles Ankyrin repeat region circular profile. 85 115 - -
Gabi4701g00047 758 ProSiteProfiles Ankyrin repeat profile. 483 515 IPR002110 GO:0005515
Gabi4701g00047 758 ProSiteProfiles Ankyrin repeat profile. 85 117 IPR002110 GO:0005515
Gabi4701g00047 758 ProSiteProfiles Ankyrin repeat profile. 346 378 IPR002110 GO:0005515
Gabi4701g00047 758 Pfam Ankyrin repeats (3 copies) 348 408 IPR002110 GO:0005515
Gabi4701g00047 758 Pfam Ankyrin repeats (3 copies) 556 635 IPR002110 GO:0005515
Gabi4701g00047 758 SMART ANK_2a 117 147 IPR002110 GO:0005515
Gabi4701g00047 758 SMART ANK_2a 309 337 IPR002110 GO:0005515
Gabi4701g00047 758 SMART ANK_2a 176 205 IPR002110 GO:0005515
Gabi4701g00047 758 SMART ANK_2a 85 114 IPR002110 GO:0005515
Gabi4701g00047 758 SMART ANK_2a 222 253 IPR002110 GO:0005515
Gabi4701g00047 758 SMART ANK_2a 483 512 IPR002110 GO:0005515
Gabi4701g00047 758 SMART ANK_2a 379 408 IPR002110 GO:0005515
Gabi4701g00047 758 SMART ANK_2a 551 580 IPR002110 GO:0005515
Gabi4701g00047 758 SMART ANK_2a 584 613 IPR002110 GO:0005515
Gabi4701g00047 758 SMART ANK_2a 346 375 IPR002110 GO:0005515
Gabi4701g00047 758 Gene3D - 289 435 IPR036770 -
Gabi4701g00047 758 SUPERFAMILY PH domain-like 642 748 - -
Gabi4701g00047 758 ProSiteProfiles Ankyrin repeat region circular profile. 584 609 - -
Gabi4701g00047 758 ProSiteProfiles Ankyrin repeat region circular profile. 346 374 - -
Gabi4701g00047 758 SUPERFAMILY Ankyrin repeat 21 256 IPR036770 -
Gabi4701g00047 758 Gene3D - 436 539 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4701g00047 Gabi-Chr4701 472361 478132 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4701g00047 520 629 MAP Kinase Kinase Kinase AT2G31800 32.727 1.26e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4701g00047 - - gmx:100795638 1178.31