Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4701g00010 ATGTCTCACAAAAAGAATACTAGTTATTCTTCAATACCCATTAGATCATATCTAGAATTGCAGCCTCAAGATGATTCCCCAAGGCTATCTTTTGATGAAACCGGGGGTTATTTGGGATCCAAGGTTGTCGTCGACCACGACGACGACAACGACGATGATTTTGAAATCGACATCGATAATTATCCGCTTGTTGTTGTCGGGCATAGTCACGGTTCTGGGGTACCTGGGGCTGTGTTCAATTTGACCACCACGATTATTGGGGCAGGGATTATGGCCCTCCCTGCAACCATGAAAGTTCTTGGAGTGATTGTGGGGATTTTGTTGATAATTCTTATGGGGATTTTGTCAGAAATTAGTGTGGAATTGTTAGTGCGTTTTTCAGTTTTGTATAATGCATCCTCCTATGGGGATGTTGTTCAACATGCTATGGGAAGGCCTGCTAAGATTTTGTCTCAAATCTGTATCATAGTGAATAATGCTGGTGTTTTGGTTGTTTACTTGATAATCATGGGGGATGTTATGTCTGGTTCCGTTCATCATTTGGGGGTTTTTGATCAGTTAATGGGAAATGGGGTGTGGGATCAGAGAAAGCTTGTGGTTTTTGTTGTTATGGTGGTTTTTCTGGCACCTCTTTGTTCTCTGGACAAGATTGATTCATTGAGCTTGACTTCAGCTGCCTCAGTGGCTCTTGCTGTCATATTTGTTGTTGTTGCTTTTACTGTTGCTTTCATTAAGCTTGTGGAAGGACGCATTGATCCTCCGAGGATGGTTCCTGATTTTAGCTCAAAAACGGCCATCTTGGATTTGCTTGTGGTGATTCCCATCATGACCAATGCATATGTTTGCCATTTTAATGTGCAGCCAATATACAATGAGCTTGAAGGGCGGTCGCCTCAGAAGATGAACCGAGTAGGAAGGATGACCACAATTTTGTGCATCCTTGTTTACGCATCAACGGCGCTGTCAGGTTACCTATTATTTGGGAAAGATACAGAGTCTGATGTGCTGACTAATTTTGATAAGGATCTTGGAATTAGGTTTAGCTCAGCCTTAAACTATATTGTCCGGATTGGCTATATCCTGCATTTGATACTTGTTTTCCCTGTTATTCATTTCTCCCTACGGCAAACGGTGAATGACTTAGTGTTTGAAAGATCACCTCCCCTATCAGAAAGTAGGAAGAGATCTCTTGGGTTGACTGTGGTTCTGTTGGTCCTCATATTTATTGGGTCTACCATGATTCCAAACATTTGGACAGCTTTTAAGTTTACTGGGGCGACGACCGCTGTTTCATTGGGTTTTATATTTCCATCTCTTGTTGCATTAAGATCAAGTCATCTGGGGGATTTGAGCCATGGAGAATGGATTTTATCATGGTTAATGTTGGTGTTAGCTGTGACTGTTAGCATAGTAGGAGTCATTGGCAATGTCTATAGCATCCAGAATAAGTCTCAGTGA 1458 0.4191 MSHKKNTSYSSIPIRSYLELQPQDDSPRLSFDETGGYLGSKVVVDHDDDNDDDFEIDIDNYPLVVVGHSHGSGVPGAVFNLTTTIIGAGIMALPATMKVLGVIVGILLIILMGILSEISVELLVRFSVLYNASSYGDVVQHAMGRPAKILSQICIIVNNAGVLVVYLIIMGDVMSGSVHHLGVFDQLMGNGVWDQRKLVVFVVMVVFLAPLCSLDKIDSLSLTSAASVALAVIFVVVAFTVAFIKLVEGRIDPPRMVPDFSSKTAILDLLVVIPIMTNAYVCHFNVQPIYNELEGRSPQKMNRVGRMTTILCILVYASTALSGYLLFGKDTESDVLTNFDKDLGIRFSSALNYIVRIGYILHLILVFPVIHFSLRQTVNDLVFERSPPLSESRKRSLGLTVVLLVLIFIGSTMIPNIWTAFKFTGATTAVSLGFIFPSLVALRSSHLGDLSHGEWILSWLMLVLAVTVSIVGVIGNVYSIQNKSQ 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4701g00010 485 Pfam Transmembrane amino acid transporter protein 71 475 IPR013057 -
Gabi4701g00010 485 PANTHER AMINO ACID TRANSPORTER 69 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4701g00010 Gabi-Chr4701 105526 107820 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4701g00010 6 485 Amino Acid or Auxin Permease AAAP Family AT1G80510 71.053 0.0 654
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4701g00010 - - gmx:100791860 760.755