Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4700g00007 ATGTGTTGTACCTGGCCTACATGCAACTCTAACTGGATAAGAATGGAGGGTTCTTCTGGGTCTGCTTGGCAGAAGTCTGAAAGTTCTAGGGCCTTAAATAGTTCTGGAGTCTCAGACAGGAACCAAAGGCTTCATTGTCCTGAAAGAAACCCCTTCTCTGGTGAGGCATCACATGATTCTGGTTTTGAAAAGGAAAAGGATAGGGTTCTGTTGGCACAAGATGATAAGCCTGAGAATCTTGGTGGGGTTTCTGGGTTTTGTGAGGATGAAGTAGAGGCTGACCCTTTTTTTTGTTCTATAGAATTGGGTGATATTAGCTTGAGGCAGTGGTTAGATAAACCTGAAAGATCAGTAGATGTCTTTGAATGCTTCCACATATTTAAGCAAATAGTAGAAATTGTTAATTTAGCGCATTGTCAAGGAGTTGTAGTTCATAATGTGAGGCCTTCCTGCTTTGTCATGTCATCTTTCAACCATATCTCATTTATTGAATCAGCATCTTGTTCAGATAGTAGCTCGGATTCTTTGGGAGATGGATTGAATAACCAAGGTGTTGAGGTTAAAACTCCAACATCTCTCTGTCCCCATGATATGCATCAGCAGAGTTTAGGAAGTGAAGATTTTATGCCTGTCAATACTTCAACAACTGCTTTGACAGATTCTAGTTGCATGCTGTCAAGTGCTGTGTATGCGGCTCGTGCATCATTAATAGAAGAAACAGAAGAGAATAAAATGAAAGATAGAAGAAAGGCTGAAGAAGTAGAAGGAAAGAATCAATCATTTCCAATGAAACAGATACTACTAATGGAGATGAGTTGGTACACTAGTCCTGAAGAGGTTGCTGGTACTCCTAGTTCCTGTGCTTCGGACGTTTACCGATTAGGGATTCTCCTTTTTGAGCTATTCTGTCCACTTAGCTCAAGAGAAGAAAAGAGTAGAACAATGTCTAACCTTAGACATAGAGTTCTTCCTCCACAGTTACTTCTAAAGTGGCCTAAAGAAGCTTCATTTTGCTTATGGTTACTACACCCTCAACCTAGTAGTCGTCCAACACTTGGGGAGTTGTTGCAAAGCGAGTTCCTTAATGAACAGAGAGATGATATGGTAGATCGTGAAGCAGCGATAGAGCTTAGACAAAGGATAGAGGATCAAGAGTTGTTGCTAGAATTCCTTTTGTTACTTCAACAGAGAAAACAGGAAGTTGCGGAGAAGCTGCAACATACTATCTCTTTTCTGTGTTCAGATATTGAAGAAGTGACCAAGCGGCAAACTAGATTTAAAGAGATTACTGGCGCTGAACTAGGGAGTGATGATCGTTCAGCATCAAGTTTCCCATCCATGACAATGGATGACAGTGAGGATTCTGGTTGTCTAGGGACTAGAAAACGAGTTAGACTAGGGATGCATGTTAAAAACATTGAGGAATGTGATGATGACATAGGTGATGATCAGAAAAATCATGGAAGTTTTCTTGAGAAAAGTTCACGGCTAATGAAGAACTTTAAGAAACTAGAGTCAGCGTACTTTTTAACACGATGCAGATCAGCCTATTCCTCAGGGAAACCAGTGGTTAGACATTCACCTATAGAAAATGATGGTAGAGGGTCTGTTGTTGCAACTGAAGGAAGTTGCATCAATAACTTAGCATCAAAAGAGCAGTGCAGGGAGGGTACAAGTGCTTGGATAAATCCTTTCCTTGAGGGTTTGTGCAAATACTTGTCTTTCAGTAAGCTAAAGGTTAAGGCTGACCTGAAGCAAGGAGATCTTTTGCATTCTTCCAATCTAGTATGCTCACTCAGTTTTGACCGTGATGGAGAATTTTTTGCTACTGCGGGTGTGAATAAGAAAATTAAAGTGTTTGAATGTGATACAATCATAAACGAGGATCGTGATATTCACTATCCGGTAGTGGAGATGGCGAGCAGTTCAAGGTTGAGCAGTATATGTTGGAATACTTACATCAAAAGTCAAATTGCTTCAAGTAACTTCGAAGGGGTTGTACAGGTGAGTCAAATGAAATGCACTTGA 2028 0.4048 MCCTWPTCNSNWIRMEGSSGSAWQKSESSRALNSSGVSDRNQRLHCPERNPFSGEASHDSGFEKEKDRVLLAQDDKPENLGGVSGFCEDEVEADPFFCSIELGDISLRQWLDKPERSVDVFECFHIFKQIVEIVNLAHCQGVVVHNVRPSCFVMSSFNHISFIESASCSDSSSDSLGDGLNNQGVEVKTPTSLCPHDMHQQSLGSEDFMPVNTSTTALTDSSCMLSSAVYAARASLIEETEENKMKDRRKAEEVEGKNQSFPMKQILLMEMSWYTSPEEVAGTPSSCASDVYRLGILLFELFCPLSSREEKSRTMSNLRHRVLPPQLLLKWPKEASFCLWLLHPQPSSRPTLGELLQSEFLNEQRDDMVDREAAIELRQRIEDQELLLEFLLLLQQRKQEVAEKLQHTISFLCSDIEEVTKRQTRFKEITGAELGSDDRSASSFPSMTMDDSEDSGCLGTRKRVRLGMHVKNIEECDDDIGDDQKNHGSFLEKSSRLMKNFKKLESAYFLTRCRSAYSSGKPVVRHSPIENDGRGSVVATEGSCINNLASKEQCREGTSAWINPFLEGLCKYLSFSKLKVKADLKQGDLLHSSNLVCSLSFDRDGEFFATAGVNKKIKVFECDTIINEDRDIHYPVVEMASSSRLSSICWNTYIKSQIASSNFEGVVQVSQMKCT 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4700g00007 675 MobiDBLite consensus disorder prediction 24 63 - -
Gabi4700g00007 675 SUPERFAMILY WD40 repeat-like 593 669 IPR036322 GO:0005515
Gabi4700g00007 675 SUPERFAMILY Protein kinase-like (PK-like) 79 360 IPR011009 -
Gabi4700g00007 675 MobiDBLite consensus disorder prediction 24 41 - -
Gabi4700g00007 675 MobiDBLite consensus disorder prediction 437 456 - -
Gabi4700g00007 675 Gene3D - 567 674 IPR015943 GO:0005515
Gabi4700g00007 675 Gene3D Transferase(Phosphotransferase) domain 1 104 373 - -
Gabi4700g00007 675 SMART serkin_6 12 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4700g00007 675 Coils Coil 237 257 - -
Gabi4700g00007 675 ProSiteProfiles Protein kinase domain profile. 1 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4700g00007 675 PANTHER PROTEIN SPA1-RELATED 2 55 669 IPR044630 GO:0009640
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4700g00007 Gabi-Chr4700 85424 89350 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK PEK_PEK Gabi4700g00007 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4700g00007 K26557 - gmx:100811457 1157.51