Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4694g00093 ATGAGGTGCTTCCCATGCTGCAAATCTGACGTTGAAACACCCTCTTTCACAACATGCACAAGGACAATTTCCAGAGGCAAGGCAACATTCAAATCATTAGCTGCTGCTATGTCACTTAAAACAGGTAGTAGCAGGAATAGACGAATTAATGATGAGATACTAAAATATGGAACTGCAAAAAATGATGTTAAAGTATTCATGTACGAAGAAGTTGCTGATGCAACAGACAACTTCAATCCTGAGTGCCTTGTGGGTGAAGGTGGATTCGGGAATGTCTATAAAGGATACATAAAAAGTCTTGATCAGACTGTAGCTGTGAAGCAACTGAACAGACAAGGAGCACAAGGAACACGAGAATTTATTGCAGAGGTTTTGATGTTAAGCATGGTGAAACATCCAAACCTTGTCAGGCTCGTTGGTTATTGTGCTGAAGGAGATCACAGGATTTTAGTTTATGAATTCATGGCCAATGGGAGTTTGGAAAATCACCTTCTAGACTTAGGTACAGATAAGGAGCCTTTGGATTGGCAGACAAGGATTAAAATAGCTGAGGGAGCAGCTAGAGGACTTGACTATCTTCATAATAGTGCAGATCCACCAGTTATATTCCGTGATTTTAAATCCTCTAATATACTGTTAGATGAAAATTTCAATGCAAAGCTATCTGATTTTGGACTTGCTAAGATTGGTCCAAGAGAAGGCCAGGACTTTGTCTCAACAAGGGTGATGGGGACCTTAGGCTATTGTGCACCAGAGTATGCTTCTAAGGGTAAGCTAAGCACAAAGGCAGACATTTATAGTTTTGGGGTTGTGTTTTTGGAAATAATCTCAGGCAGGAGAGTAATTGACACTTCAAGAGCTACAGAAGAGCAAAACTTGATTGATTGGGCACAACCTTTGTTTAAGGACAGAACCAAGTTTACTCTTATGGCTGACCCTTTGCTTAAAGGTCAGTTCCCTGTGAAGGGCCTATTTCAAGCTCTGGCAGTGGCAGCAATGTGTCTACAAGAAGAAGCTAACACAAGACCTTTCATGGATGATGTTGTAACGGCTCTTACGCATCTATCAGCACATAGAACTGGAGAACAAGACATTGCTGGTGAATCTATAAAAAGTGCTGGGCATGTTGAATCTTTTAGAGCTCCAAGTTCATGTGGATCTGAAAGGTCAGCTAGCTTCATTGGCCAGACACAGACTAGGATTCACTGA 1209 0.4127 MRCFPCCKSDVETPSFTTCTRTISRGKATFKSLAAAMSLKTGSSRNRRINDEILKYGTAKNDVKVFMYEEVADATDNFNPECLVGEGGFGNVYKGYIKSLDQTVAVKQLNRQGAQGTREFIAEVLMLSMVKHPNLVRLVGYCAEGDHRILVYEFMANGSLENHLLDLGTDKEPLDWQTRIKIAEGAARGLDYLHNSADPPVIFRDFKSSNILLDENFNAKLSDFGLAKIGPREGQDFVSTRVMGTLGYCAPEYASKGKLSTKADIYSFGVVFLEIISGRRVIDTSRATEEQNLIDWAQPLFKDRTKFTLMADPLLKGQFPVKGLFQALAVAAMCLQEEANTRPFMDDVVTALTHLSAHRTGEQDIAGESIKSAGHVESFRAPSSCGSERSASFIGQTQTRIH 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4694g00093 402 Gene3D Transferase(Phosphotransferase) domain 1 155 374 - -
Gabi4694g00093 402 FunFam Serine/threonine-protein kinase CDL1-like 49 154 - -
Gabi4694g00093 402 Gene3D Phosphorylase Kinase; domain 1 38 154 - -
Gabi4694g00093 402 PANTHER OS07G0668900 PROTEIN 3 361 - -
Gabi4694g00093 402 MobiDBLite consensus disorder prediction 383 402 - -
Gabi4694g00093 402 FunFam Serine/threonine-protein kinase PBS1 155 369 - -
Gabi4694g00093 402 SUPERFAMILY Protein kinase-like (PK-like) 63 351 IPR011009 -
Gabi4694g00093 402 Pfam Protein kinase domain 83 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4694g00093 402 ProSiteProfiles Protein kinase domain profile. 78 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4694g00093 402 CDD STKc_IRAK 84 355 - -
Gabi4694g00093 402 MobiDBLite consensus disorder prediction 377 402 - -
Gabi4694g00093 402 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4694g00093 Gabi-Chr4694 807277 809300 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4694g00093 40 361 Glycoside Hydrolase AT3G07070 61.180 1.07e-140 405
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Gabi4694g00093 Pkinase 7.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4694g00093 - - vvo:131599912 637.876