Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4694g00067 ATGGATCAAAACCAGTATGGGGAACAAGGAGGAAAAGCACATAGCACTAACCAATATCAATGTAATAACCACATGAATATGATGGGACCCACCCATCTTCCAACTCAGATAGGTGGTCCTTTTGCCCTGTATCCCTACATGACAGAGCAACAATATGGTCACCAATACATGCACCAATTACAACAACAACAACAACAAGGACCAGGAGGATTATTGGAGCAACAACTCAACAACTTCTGGGCTACGAATTACCAAGAAATTGAGGAGACCACTGATTTTAGGTTTCATAGCTTGCCTCTGGCAAGGATTAAGAAGATAATGAAGACTGATGAGGATGTAAAGATGATATCAGCTGAGGCTCCTGTTGTATTTGCTAAGGCATGTGAAATGTTCATTATTGAGCTTACAATGAAGGCTTGGGTTAATGCTAATGAGAACAAAAGGAGGACACTTCAGAAGAGTGATATTGCTGATGCAATATCAAAAACTGAAGTCTTTGATTTTCTGGTTGATGTTGTCCCCAAGGATGAACCTACAACGGATCATGATTTATTTGTTCCCATTGGGAATGTTCCTCCTAACTATGTGCCATCACCAAACTTTGTTACACTTGCACCACCATATGGTGCTCCTGTAATGGTCATGGGAAGGCCTATTTTTCCTCCTCTTGCAACTCGAATGTTGCCCATTCCCAAACAAGAAAATGATCATGCTAGCTCCTAA 723 0.4108 MDQNQYGEQGGKAHSTNQYQCNNHMNMMGPTHLPTQIGGPFALYPYMTEQQYGHQYMHQLQQQQQQGPGGLLEQQLNNFWATNYQEIEETTDFRFHSLPLARIKKIMKTDEDVKMISAEAPVVFAKACEMFIIELTMKAWVNANENKRRTLQKSDIADAISKTEVFDFLVDVVPKDEPTTDHDLFVPIGNVPPNYVPSPNFVTLAPPYGAPVMVMGRPIFPPLATRMLPIPKQENDHASS 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4694g00067 240 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 63 178 - -
Gabi4694g00067 240 FunFam Nuclear transcription factor Y subunit gamma 57 175 - -
Gabi4694g00067 240 Pfam Core histone H2A/H2B/H3/H4 88 160 IPR007125 GO:0003677
Gabi4694g00067 240 SUPERFAMILY Histone-fold 42 169 IPR009072 GO:0046982
Gabi4694g00067 240 Gene3D Histone, subunit A 55 175 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4694g00067 Gabi-Chr4694 679949 680671 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4694g00067 76 204 CCAAT-HAP5 Transcription Factor Family AT1G56170 65.116 1.31e-54 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Gabi4694g00067 CBFD_NFYB_HMF 5.4e-19 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4694g00067 K08066 - gmx:100808341 205.297