Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4694g00064 ATGGCTATTGATCATCAATATCATCTCTTGCTGTTTTTCTTCCTAGCGTTACTTCCATTTTCTACTGTTGCTCAAACTTATGGGAACATTTCCTTGGGGACTTCCTTCACTGCACAAGCAGATAACTCCTCATGGGCAGCATCGCCATCTGGTGACTTTGCATTTGGGTTCCAACAGATTGAGGAAAATGGGTTCTTACTATCCATTTGGTTCAACAAAATACCAGAAAGAACCATTGTCTGGTCAGCCAATGGACAAAACCTTGCACCAAAGGGTTCAAAAATTGAGCTCACCTCAGATGGATGGTTCTTGCTCAGTGATCCCAGTGGCAATAAGATATGGCCTGCTGGTTCCTCAGGTGGTGGAACTGTTTATGCAGCAATGCTTGATACTGGCAACTTTGTTCTTGCAGGCAAAAATTCTCAATATTTGTGGCAGAGTTTTAATCAACCAACTGACACAATTTTACCAGGACAGGTTCTGAACCAACCTGGTACTCTTGTTGCAAGATATCTTGAGACAAATCACTCAAGTGGAAGATTCCAGTTTGTGCTAAACACTGATGGGACTCTTGCGCTTTACACCACAAATTTCCCAATATTGAATTCTCTAAATTATCCTTATTGGAATACCAAGGTTGTTGGCCGTGGCTTCTCATTGGTCTTCAACAATACTGGGTATATTTTCCTAGGTGCAAATAATGGGAGCATAATTCAAATGATATCATCAAATGCTCCCTCTACTCAAGATTTCTACCAGAGAGCAATCCTTGAACATGATGGAGTTTTCAGGCACTATGTCTACCCCAAGAGTAGTAGCTCCAATCAGAAGGCTTGGTCATCTGTGTCCTTTATACCTTCAAATATCTGTATGAGTATTACTGAACCAGTAGGAAATGGAGCTTGTGGGTTCAACAGCTATTGTACTCTTGATGGGGGAAAGAGTTGCCAGTGTCCATCTGGTTATAGCTTCATTGATCCAGGTGATGTGATGAAGGGATGCATGCAGGACTTTGATTCTCAGAGTTGTAATGAATCTTTCCCAGAAACTGATCTCTTTGATTTCTATGAGATGGAAAATACGGATTGGCCTTATTCAGATTTTGAACATTTTCAGTCAGTGACTGTGGATTGGTGCAGACAGGCTTGCTTGGTTGATTGTTTCTGTGCTGTTGCCATTTTCAGAAACGGTGAATGCTGGAAAAAGAAGCTACCCTTATCCAATGGAAGAATTGATTCAACTGTTGGAGGGATAGCTCTGATAAAGACAAGAAAAGATAATTCTACAACGAAATTTGAGGGTCCTATTAAAAGGAATAATCAGTCAAAGCTGATTATTGTTGGATCAGTGCTTTTAAGTAGTTCTGTGGTGGTAAACTTGTTCTTGTTAGTGACAGCTTTTCTAGTTGCATACAGGTTTGGCCACAGGAATTCTCAGGTGAATCAATCAAGCCAACTCATCACAGGCATGTTTCTTAGAAGTTTCACTTATGAAGAGTTAAGGAAGGCAACAAATGGATTCAAGGAAGAGCTGGGTCGTGGTGCATTTTCAACAGTTTACAAAGGAGTTCTGTTAGACCTTATGGAGAACCCCATTGCTGTTAAGAAGTTAAACAATATGGTCAAAGAAAATGAAGATGAGTTCAAAACAGAAGTGAGTGCAATTGGTAGGACAAATCATAGGAATTTGGTCCAACTTGTAGGATTTTGTAACGAGGGAGAGCATAGGCTACTTGTCTATGAGTTCATGAGCAAAGGATCTTTAGCAAGCTTCCTTTTTGACTCCCAAAGACCAACATGGTTTCAAAGAATGCAGATTGCTTTAGGGACAGCCAGGGGACTCTTGTATTTGCATGAAGAGTGCACTACCCAAATCATACACTGTGACATTAAGCCTCAAAATGTTTTGCTTGATGACAGTTGCACTTCTAAGATATCTGACTTTGGCTTAGCCAAGCTTTTGAAGATTGACCAAATTGGAACTAATACAGCAATAAGGGGTACTAAAGGGTATGTTGCCCCGGAATGGTTTAGGAACATGCCTATTACCATTAAGGTTGATGTTTACAGTTATGGAGTTTTGTTGCTAGAAATCATTTGCTGCAGGAAGAGCTTTGAGTCAAAGGTTGAGAATGAGAACCAGATGGTACTGATAGATTGGGCCTATGATTGCTTTCAGGAAAGGAAACTTGATCTGTTGGTGGTAGATGACAAGGATGCCTTAGATGACATGAAGAGGGTGGAAAAGTATGTTATGGTTGCTCTATGGTGTGTTCAGGAGGATCCATCCCTAAGACCCACCATGAAGAAAGTTTTACAGATGCTTGAAGGATCTACAGATGTACCAATCCCTCCTGATCTTCCCTCATTCACAATTTCAATGTAA 2385 0.4063 MAIDHQYHLLLFFFLALLPFSTVAQTYGNISLGTSFTAQADNSSWAASPSGDFAFGFQQIEENGFLLSIWFNKIPERTIVWSANGQNLAPKGSKIELTSDGWFLLSDPSGNKIWPAGSSGGGTVYAAMLDTGNFVLAGKNSQYLWQSFNQPTDTILPGQVLNQPGTLVARYLETNHSSGRFQFVLNTDGTLALYTTNFPILNSLNYPYWNTKVVGRGFSLVFNNTGYIFLGANNGSIIQMISSNAPSTQDFYQRAILEHDGVFRHYVYPKSSSSNQKAWSSVSFIPSNICMSITEPVGNGACGFNSYCTLDGGKSCQCPSGYSFIDPGDVMKGCMQDFDSQSCNESFPETDLFDFYEMENTDWPYSDFEHFQSVTVDWCRQACLVDCFCAVAIFRNGECWKKKLPLSNGRIDSTVGGIALIKTRKDNSTTKFEGPIKRNNQSKLIIVGSVLLSSSVVVNLFLLVTAFLVAYRFGHRNSQVNQSSQLITGMFLRSFTYEELRKATNGFKEELGRGAFSTVYKGVLLDLMENPIAVKKLNNMVKENEDEFKTEVSAIGRTNHRNLVQLVGFCNEGEHRLLVYEFMSKGSLASFLFDSQRPTWFQRMQIALGTARGLLYLHEECTTQIIHCDIKPQNVLLDDSCTSKISDFGLAKLLKIDQIGTNTAIRGTKGYVAPEWFRNMPITIKVDVYSYGVLLLEIICCRKSFESKVENENQMVLIDWAYDCFQERKLDLLVVDDKDALDDMKRVEKYVMVALWCVQEDPSLRPTMKKVLQMLEGSTDVPIPPDLPSFTISM 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4694g00064 794 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Gabi4694g00064 794 Gene3D Transferase(Phosphotransferase) domain 1 583 785 - -
Gabi4694g00064 794 CDD STKc_IRAK 511 777 - -
Gabi4694g00064 794 SMART serkin_6 505 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4694g00064 794 Gene3D Phosphorylase Kinase; domain 1 469 582 - -
Gabi4694g00064 794 CDD PAN_AP_plant 341 423 - -
Gabi4694g00064 794 ProSiteProfiles Bulb-type lectin domain profile. 32 149 IPR001480 -
Gabi4694g00064 794 PIRSF SRK 1 794 IPR024171 GO:0004674
Gabi4694g00064 794 ProSitePatterns Protein kinases ATP-binding region signature. 511 536 IPR017441 GO:0005524
Gabi4694g00064 794 SUPERFAMILY alpha-D-mannose-specific plant lectins 65 211 IPR036426 -
Gabi4694g00064 794 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 36 785 - -
Gabi4694g00064 794 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 583 783 - -
Gabi4694g00064 794 Pfam D-mannose binding lectin 78 161 IPR001480 -
Gabi4694g00064 794 FunFam S-receptor-like serine/threonine-protein kinase 475 582 - -
Gabi4694g00064 794 Gene3D - 151 279 IPR036426 -
Gabi4694g00064 794 FunFam Serine/threonine-protein kinase 152 293 - -
Gabi4694g00064 794 CDD B_lectin 51 151 IPR001480 -
Gabi4694g00064 794 ProSiteProfiles Protein kinase domain profile. 505 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4694g00064 794 SUPERFAMILY Protein kinase-like (PK-like) 480 776 IPR011009 -
Gabi4694g00064 794 Pfam Protein kinase domain 508 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4694g00064 794 SMART blect_4 32 151 IPR001480 -
Gabi4694g00064 794 Gene3D - 34 150 IPR036426 -
Gabi4694g00064 794 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 24 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4694g00064 Gabi-Chr4694 628383 630767 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4694g00064 453 785 Receptor kinase-like Gene Family AT4G18250 40.116 7.56e-71 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gabi4694g00064 Pkinase 2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4694g00064 - - aip:107638596 1178.7