Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4694g00043 ATGATTATCCCAGTATCTTCTGCCCCTGCTTGCAAACAAGTACTGCCCCTAATAAATTTCCAAAAGGGGCTCACCAATATGGAGTCCTTGTCCTTGTTTCACCATCGCAAGGATAAGGTTGTTGTGATATTGGGGGCCACAGGAACCGGCAAGACGAAGCTGGCAATAGACTTGGCCAACCATTTCCCACCAGCGGAGATAGTGAACTCTGACAAAATGCAAGTTTACAAGGGTCTTGACATCACAACCAATAAGGTAACAGAGGAAGAGACTCGTGGGGTCCCACATCATCTTCTAGGCATGGTTGATCCTAACTTAAATTTCACTGCTAATGACTTTTGTCTCCATGCCTCTTTGGCCATCGATTCCATCGTGGGAAGGGATGGCTTACCCATAATTGCTGGGGGTTCCAATTCCTACATAGATGCTTTGGTGAACCATAACACAGAGTTTAGGTTAAGGTACGAGTGTTGCTTCCTCTGGGTAGATGTTTCACTCCCTGTGCTCCATTCCTCACTACATGCACGTGTAGATCGCATGATAGAGGGTGGTCAACTTGACGAGGTTCGTGAATTCTTCGACCCTTGTGCTGATTACACGAGAGGGATTCGAAGGGCCATTGGGGTTCCTGAATTTCACGATTTCCTAAGAGCAGAGTCAACAACAGAGGATTACAGAATAAAGAAGAGGCTCCTCGAGAGTGCCATTGAGAGGATCAAAGTCAATAACTGCACGCTCGCAAATCGCCAGCTCCAGAAGATTCATCGCCTGCACAGCATGTGGAAACGGAGCATGCACCGCCTCGACGCCACCGAGGTTTTCCTCAAAAGTGGCTCTGATGAACAGGCACGGGAAGCGTGGGAGGATCACGTGCTGGCAAAGAGTCTTAGGATCGTGCACAAGTTCCTGTACGAGGAATCCCATGTTGTTCCCGCTGGAATTGTGTCCCCAAAAGATGTAATTACTGCTGTTTCTGCCCCACCGCCGCCCGTAGCAATGGCTGCCGTTGCGGCTGCAACCCATTAG 1026 0.4912 MIIPVSSAPACKQVLPLINFQKGLTNMESLSLFHHRKDKVVVILGATGTGKTKLAIDLANHFPPAEIVNSDKMQVYKGLDITTNKVTEEETRGVPHHLLGMVDPNLNFTANDFCLHASLAIDSIVGRDGLPIIAGGSNSYIDALVNHNTEFRLRYECCFLWVDVSLPVLHSSLHARVDRMIEGGQLDEVREFFDPCADYTRGIRRAIGVPEFHDFLRAESTTEDYRIKKRLLESAIERIKVNNCTLANRQLQKIHRLHSMWKRSMHRLDATEVFLKSGSDEQAREAWEDHVLAKSLRIVHKFLYEESHVVPAGIVSPKDVITAVSAPPPPVAMAAVAAATH 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4694g00043 341 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 195 IPR027417 -
Gabi4694g00043 341 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 166 265 - -
Gabi4694g00043 341 Gene3D - 37 303 IPR027417 -
Gabi4694g00043 341 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 37 303 IPR039657 -
Gabi4694g00043 341 Pfam IPP transferase 74 147 - -
Gabi4694g00043 341 Pfam IPP transferase 152 252 - -
Gabi4694g00043 341 FunFam Adenylate isopentenyltransferase 5, chloroplastic 166 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4694g00043 Gabi-Chr4694 369173 371522 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4694g00043 154 307 C2H2 Transcription Factor Family AT2G27760 32.222 2.59e-21 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4694g00043 K10760 - gmx:100812928 473.781