Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4694g00033 ATGTATTCTAAGTATGATTTTATTAAGGATCTTAATCCTACTAAGGAGGAGTGGAAGATTAAGGCTAGAGTTGTTAGAACATGGAAGGTTCCTAATTTTCAGCAAAAAAAATTTGACGACAACGTAGAGATGATTCTGTTAGATGAAAAGGGTGGAAGGATCCACGCTGCTATCAAGGGTTCTTTGCATATCCGTAAAAAAATTCACGAAGGAGAAGTTTATTTCATAAAAATTTTTGGAGTTGGTTCGAATACTGGTAGTTTCAGGCCAACTAAGCATGATTATCGTTTGTCTTTCAACTTGAGGACTGATGTAAAATCCACTATTGATTCTGCTATTCCCACCAATGGATTTGATTTTGTAGATTTTGACGTTATAGAGAAAGAGTTTTCTGATTCCCCTTATTTAGTAGATGTCATCGGTTTAGTCTCTGGAATAGGAGAAGTTCGTGAGCATATTATCTCCGGTAGGAAGACAAGAATGGTTGTCGTGGAGCTTGATAACCTCAGTTCGATAAACAGTGAAGATATGCTTGATCCTGATATTGTCCTATCATTAAAGGAAATGTTGGATAAACACAACAGTATTGCTCAATCTTTTAGGTACGCTAGAGATCGATATAGGGACAATGACTTTACTGGAGTGAAGTTGAGGCTTATTCGAAAGCGTGGCAGTGATGGCAGAGTTTATAATCTTTCGTCTGCGTCAGAAGTTGCTGCTCTTATTGTTGGGGATATAGACAGCGCATTGGGTGATAGGGATATTGTTGTTGAGACACAAGATATAGTTTTGCAGCGTATAGATGTCAAGCATCCGTTGTATCTTGGATTGCAGTATCCTTTGTTATTTCCTTATAGTGAAGATGGTTATCGTGATGATGTCGAGCGATCTTATACATCCCATGGTAGGACTAATCCAAGATCCACTTCTGATCGGCTGAATTTTATTCGATATAACCAGAGTCATCTCAGGGCAGAGTTATACAAAAATATTAAAAATGCATTTGACAGGGGTGAAGATGAAGCTATAAACACTGGAAAGCGTATCATTATTCATTCTTCGTTCACAGGCGGACCTAGATATATGGCTGAGAATTGTAAAGATGCCTTTGCAATCTGCCGTTGGGCTGGATATCCTCATCTGTTTATAACGATCACCTGCAATCCTAAGTGGCCAGAGATTACCAGATTTCTTAAGGCAAGAAAACTCAACGCTGAAGATGATGTTTGTACAGTTGAATTTCAGAAACGTGGACTGCCTCATGCTCATATTCTACTTTTCTTGCATCCCTCCGAAAAGCCTAATACTGGACTTGACATTGATAATTTGATTTCAGCTGAGATTCCTAACAAAGATTCCAATCCTTCACTTTTTGCAGCTGTCACTAGTTATATGATGCATGAACCCTGTGGTCCTGACAATTACAAGTCTCCTTGCATGAAGAACGGACATTGTTCAAAGAAATTTCCCAAGAAGTTCTGCTCCCGTACTTTTATTGATGATGATGGATTCCCTCATTATAGAAGAAGAAATGATGGGAGTGTTGTCAAAAAGAACGGTGTTGAACTTGATAACCGTTATGTTGTGCCGTATAATGCAAAACTCCTTCTAAAATATCAAACGCATATCAATGTTGAATATACTTGTCAGAGTAGTGCCATTAAATATCTCTTTAAATACATCCATAAAGGGAAAGACAAGGTGACAGCTGCTATAAATCATTCAGATGATGAAATCAAAATGTTTTATGATTGCAGTGATCATGCTTCAATAACCAATGTCAAGACTAAGGCGGAGTCTAGACAATCAATGTTCGAGTCTTGGATGGATGCAAATAAAAAATATCCAGAAGGTAGGAATCTTACTTATGCAGAGTATCCAACTCAATTTGTATATAAAGAAAGTATGCATGAATGGCATCCCAGAAAACAAGGATTTTCAATTGGAAGAATAAATCATTTTTCTGCCAATAATGGAGAAGATTCCTATCTCCGAACTTTACTTAATTTTCAAAAGGGTTGTGCAAGTTATGAAGATTTGAGAACGGTCAATGGGGTGCTTTTTCCTACATATAAGGATGCCTGCTATTCTTTGGGGCTTTTGGATGATGACAATGAGTACATTGATGCAATTAAGGAGGCAAGTTCTTGGGGGTCAGCAACTTATCTGAGAAATCTGTTTGCCTTATTGTTATTTGGTAACTCAATGAACAAGCCTGAAAATGTTTTCCAAAAATGCTGGGAATTACTATCTAACGATGTTCTTTATCGGCATAGGCAAAGAATTGGACGTGAAGATGCTTTGCTTACAGAGGATTCTATAAAAACACATAACCCTTGCAGAAATCGATAA 2352 0.3754 MYSKYDFIKDLNPTKEEWKIKARVVRTWKVPNFQQKKFDDNVEMILLDEKGGRIHAAIKGSLHIRKKIHEGEVYFIKIFGVGSNTGSFRPTKHDYRLSFNLRTDVKSTIDSAIPTNGFDFVDFDVIEKEFSDSPYLVDVIGLVSGIGEVREHIISGRKTRMVVVELDNLSSINSEDMLDPDIVLSLKEMLDKHNSIAQSFRYARDRYRDNDFTGVKLRLIRKRGSDGRVYNLSSASEVAALIVGDIDSALGDRDIVVETQDIVLQRIDVKHPLYLGLQYPLLFPYSEDGYRDDVERSYTSHGRTNPRSTSDRLNFIRYNQSHLRAELYKNIKNAFDRGEDEAINTGKRIIIHSSFTGGPRYMAENCKDAFAICRWAGYPHLFITITCNPKWPEITRFLKARKLNAEDDVCTVEFQKRGLPHAHILLFLHPSEKPNTGLDIDNLISAEIPNKDSNPSLFAAVTSYMMHEPCGPDNYKSPCMKNGHCSKKFPKKFCSRTFIDDDGFPHYRRRNDGSVVKKNGVELDNRYVVPYNAKLLLKYQTHINVEYTCQSSAIKYLFKYIHKGKDKVTAAINHSDDEIKMFYDCSDHASITNVKTKAESRQSMFESWMDANKKYPEGRNLTYAEYPTQFVYKESMHEWHPRKQGFSIGRINHFSANNGEDSYLRTLLNFQKGCASYEDLRTVNGVLFPTYKDACYSLGLLDDDNEYIDAIKEASSWGSATYLRNLFALLLFGNSMNKPENVFQKCWELLSNDVLYRHRQRIGREDALLTEDSIKTHNPCRNR 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4694g00033 783 Gene3D - 112 175 IPR012340 -
Gabi4694g00033 783 SUPERFAMILY Nucleic acid-binding proteins 5 110 IPR012340 -
Gabi4694g00033 783 Gene3D - 4 107 IPR012340 -
Gabi4694g00033 783 Pfam Helitron helicase-like domain at N-terminus 307 407 IPR025476 -
Gabi4694g00033 783 Pfam Domain of unknown function DUF223 43 129 IPR003871 -
Gabi4694g00033 783 PANTHER UNCHARACTERIZED 319 745 - -
Gabi4694g00033 783 CDD RPA1_DBD_A_like 19 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4694g00033 Gabi-Chr4694 268004 271554 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4694g00033 11 189 Core DNA Replication Machinery Family AT5G08020 26.214 1.42e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4694g00033 - - ahf:112729630 623.239