Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4694g00006 ATGATTTTGAAGGAGCATCCTGTTGGTACTGAATTGGCAATGAATAATGCCAGTGTGGAGGAGGAAATAGATTTTTCTTGTGAACCATACATAGGGTTAGAATTTGATTCATCAGATGATGCACTTAAGTTTTACACATCATATGCAAATCGGACGGGATTTAAAGTTCGGATTGGTCAGCTTTATCGATCAAGAACTGATGGGTCAGTCTCTTCGCGAAGATTTGTGTGCTCGAAGGAGGGATATCAGCTCAGTTCAAGAACAGGCTGTCCAGCATTCATAAGGGTGCAAATAAATGGTTCTGGAAAGTGGGTTGTTGATCATTTTCATGAGGACCACAATCACAATCTTGAAATCGAAAGTGAAAATTGCACTCCAACATTGCAACAGAAGGGTGCTACAGCTATCAATTCTCTTACTGAAGTGCCTCGCAGGCCAAGGAAGAAATTGCTCAAAGAAGACAATGATGAACTCTCTTGTCCTGTTGGCATTATTAATTTCAAGCGCCTGAGAAAGGAAGAACTTGAAGGACAGTCCATGATTGAACCATTTGTCGGTCAAGAGTTCAGTTCGCCCAATGAAGCATACCAATTTTATCATGCATATGCAGCATATTTGGGTTTTGCAATTCGAATTGGTCAATTGTTTCGTTCTAAGAATGATGGGTTGATCACATCACGCCGTTTTGTGTGCTCAAAAGAGGGGTTCCAGCGCCCTTCAAGAGTTGGTTGTGGGGCATATTTGAGGATTAAGAGACAACCATCGGGAAAGTGGGTAGTGGACCGTCTCCAAAAAGATCATAATCATGATCTGGACTCTGAAAAGGAAGGTAGGGCAAAAAGTCTTCCTGCTTCTAACATTTTGACTGAGGAGGTAGATACTGGACTGGTAAATGGTGACTTATTTAGGATAGATAACTACCCTGTCCCTAGAGGAGTTAGACAAAATCACATTAAAAGTGATTGGTACAGTGTGCTTTTAGAGTATTTTCAATCAAGACAAGCAGAAGATACTGGATTCTTTTATGCTGTGGAAGTTGATAATAGTAATTGCATGAGCATATTTTGGGCTGATGGCAGATCTAGATATTCATGTAGTCAGTTTGGTGATGTCCTTGTTATAGACACATCATACCGAAAAAGTATCTATTTGGTACCATTTGCTACTTTTGTTGGAGTTAACCATCACAAGCAACCTGTTCTTCTTGGATGTGCTCTAATTGCTGATGAATCTGAAGAGTCTTTCACTTGGTTGTTTCAGACATGGCTGAGGGCAATGTCTGGCCGGCAGCCTCTATCAGTAATAGCTGATCAAGACATTGCAATCCAGAGGGCAATAGCAAAAGTCTTTCCAGTAACCCATCATCGCTTTTCATTGTGGCAAATTAAGGCAAAGGAACAAGAAAACATGGGTATGATGGGTAGTGGGTTTACAACAGATTACGAAAAGTGTGTTTACCAGAGTCAGACAGTTGATGAATTTGACACCACATGGAATGCCCTACTCAACAAATATGGATTGAAGGACAATGCTTGGCTAAAAGAAATGTATGAGAAGCGTGCATCCTGGGCTCCATTATATTTAAAGGGCACATTTTTTGCTGGCATTCCCATGAATGAAAGTTTGGATTCATTCTTTGGTGCACTTTTAAATGCCCAAACGCCTCTCATGGAGTTCATTTCACGCTATGAAAGAGGTCTTGAGCGACGCCGTGAGCAAGAAAGGAAAGAGGATTTCAATACTTCTAATTTTCAACCCTATTTGCAAACAAAAGAACCAGTAGAAGAGCAATGTAGAAGGCTTTACACTCTTGCAGTATTCAAAGTATTTCAAAAAGAGCTTTTGCAGTGCTATAGTTATCTTGGGTTTAAAATATATGCAGAAGGGGGGCTCAGCAGATATTTGGTGCGTAGGGGTGGAAATGATGTGGAGAAGCATGTCGTTACATTTAGTGCATCCAATCTCAGTATTAGTTGTAGTTGTCAGATGTTTGAATATGAAGGTGTTCTTTGTAGACATGCATTGAGGCTTTTCCAGATATTGGAATTACGAGAAGTTCCTTCTCGCTACATCTTGCACCGATGGACTAGAAATGCTGAGGAAGGTGTTTTTCCTGACATAGAATCATGGAGTAGCTCTCAGGAACTCAAAAATTTGATGCTATGGAGTCTAAGAGAAACTGCATCTAAATACGTTGACGCTGGTGCAACATCTATTGAAAAGTATAAACTTGCCTATGAGATTTTGCGAGAGGGTGGGAGGAAGCTATGTTGGCACAGGTGA 2283 0.4065 MILKEHPVGTELAMNNASVEEEIDFSCEPYIGLEFDSSDDALKFYTSYANRTGFKVRIGQLYRSRTDGSVSSRRFVCSKEGYQLSSRTGCPAFIRVQINGSGKWVVDHFHEDHNHNLEIESENCTPTLQQKGATAINSLTEVPRRPRKKLLKEDNDELSCPVGIINFKRLRKEELEGQSMIEPFVGQEFSSPNEAYQFYHAYAAYLGFAIRIGQLFRSKNDGLITSRRFVCSKEGFQRPSRVGCGAYLRIKRQPSGKWVVDRLQKDHNHDLDSEKEGRAKSLPASNILTEEVDTGLVNGDLFRIDNYPVPRGVRQNHIKSDWYSVLLEYFQSRQAEDTGFFYAVEVDNSNCMSIFWADGRSRYSCSQFGDVLVIDTSYRKSIYLVPFATFVGVNHHKQPVLLGCALIADESEESFTWLFQTWLRAMSGRQPLSVIADQDIAIQRAIAKVFPVTHHRFSLWQIKAKEQENMGMMGSGFTTDYEKCVYQSQTVDEFDTTWNALLNKYGLKDNAWLKEMYEKRASWAPLYLKGTFFAGIPMNESLDSFFGALLNAQTPLMEFISRYERGLERRREQERKEDFNTSNFQPYLQTKEPVEEQCRRLYTLAVFKVFQKELLQCYSYLGFKIYAEGGLSRYLVRRGGNDVEKHVVTFSASNLSISCSCQMFEYEGVLCRHALRLFQILELREVPSRYILHRWTRNAEEGVFPDIESWSSSQELKNLMLWSLRETASKYVDAGATSIEKYKLAYEILREGGRKLCWHR 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4694g00006 760 ProSiteProfiles Zinc finger SWIM-type profile. 646 682 IPR007527 GO:0008270
Gabi4694g00006 760 Pfam MULE transposase domain 371 464 IPR018289 -
Gabi4694g00006 760 Pfam FAR1 DNA-binding domain 197 271 IPR004330 -
Gabi4694g00006 760 Pfam FAR1 DNA-binding domain 43 117 IPR004330 -
Gabi4694g00006 760 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 16 122 IPR031052 GO:0006355
Gabi4694g00006 760 SMART 26again6 657 684 IPR006564 GO:0008270
Gabi4694g00006 760 Pfam SWIM zinc finger 652 679 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4694g00006 Gabi-Chr4694 11407 14528 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gabi4694g00006 MULE 3.4e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4694g00006 - - gmx:100816656 1389.4