Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4689g00003 ATGCAACTACTTATAACTTCACCACCCTCTCTCTCACCCATGCCATCTTTTCCCTTAAATTTCCCTTGTGCTGTACAAGGAACTATATTTTCTCAAAGGAAACAATTGACTCATGGATGCACAAACCAGAAATCAAAGGATTACATAGTGGAGGATAGTTCCATATTACATTCTGAGAAAGCATTAAGGAGGAAACTTCTTATCCTTTCTGTTTTGGTCTCAACTGGTGTTTTTCCAACTTTTTCTTCTAATGGGAAAACAAAGAGTTTGAATCCATATGATGAAAAACGCTTGCTACAACAAAATAAGCGCGTACAGAAAGAAAACAATGCACCAGAAGACTTCCCGAGTTTTATTAGAGAAGGTTTTGAAGTTAAAGTTCTATCTTCAGATAACTATGTGAAGTCTGATTCAGGGCTCATATACCGAGATTTTGAAGTTGGTAAAGGTGATTGCCCAAAGGATGGTCAACAGGTGATTTTTCACTATGTTGGCTATAATGAATCTGGGCGCCGAATTGACAGCACTTATTTGCAGGGTTCTCCTGCCAGAATCCGCATGGGTACTAAGGCATTGGTTCCAGGATTTGAGGAAGGAATTAGAGACATGAGACCAGGTGGGAAGAGAAGAATCATTATCCCCCCTGAACTTGGACCACCGCAATAA 666 0.3994 MQLLITSPPSLSPMPSFPLNFPCAVQGTIFSQRKQLTHGCTNQKSKDYIVEDSSILHSEKALRRKLLILSVLVSTGVFPTFSSNGKTKSLNPYDEKRLLQQNKRVQKENNAPEDFPSFIREGFEVKVLSSDNYVKSDSGLIYRDFEVGKGDCPKDGQQVIFHYVGYNESGRRIDSTYLQGSPARIRMGTKALVPGFEEGIRDMRPGGKRRIIIPPELGPPQ 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4689g00003 221 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 153 218 IPR001179 GO:0003755
Gabi4689g00003 221 SUPERFAMILY FKBP-like 88 218 - -
Gabi4689g00003 221 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP20-2, CHLOROPLASTIC 5 220 IPR044239 -
Gabi4689g00003 221 Gene3D - 98 220 IPR046357 GO:0003755
Gabi4689g00003 221 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 156 221 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4689g00003 Gabi-Chr4689 22811 27132 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4689g00003 146 218 Calmodulin-binding Proteins AT5G48570 34.247 8.71e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4689g00003 - - gmx:100305486 364.77