Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4684g00003 ATGGAGGTTAAACGACGCGCCGTTCGCACCCTCGTCTCGAAGCTAAGCTCCGTGTCCGAACGCACCCGAATCGACGCACTCTGCGAGCTTCGTCTCATGTCCAAGCAGGAACCGGAAACCCGACCCATGATTGCCGAATCCGGAGCTATCCCATACCTCGCTGAAACCCTCTATTCCTCTTCTCATCCTTCACAGGAAAACGCCGCTGCAACACTTCTCAACCTCTCTATAACAGAAAAGGAGCCCATTATGTCCACGCGCGGCGTCCTCGACGCAATCGCACACGTCATCTCGAACCATAACTCTAGCTCTTCCCCCGCCGCCGTGCAGTCTTCCGCCGCCGCCATCCACAGCTTACTCTCCTCCGTCGATGATTACCGTCCTGTTGTCGGTTCCAAGCGCGAGATTGTCTACGCGCTTGTTGATATCCTCCGGTGCCACGTGTCGTCTCCGCCGCGGACGATTAAGGACGCGCTTAAGGCTCTGTTTGCAATCGCGCTCCACCCGCTCAACCGCGCTACGATGGTGAATTTTGGTGCGGTTCCTGCGCTGTTTTCGCTGGTGGTGAAGGACGGGAGGGTGGGGATCGTGGAGGATGCTACGGCGGTGATCGCGCAGGTGGCCGGGTGCGAGGAGAGCGTCGAGGCGTTCCGGAAGGGGTCCGGATTCGGCGTACTCGCGGATCTCCTCGACCTGGCTACCGGATCCAGCTTGCGGACCAAGGAGAATGCGGTGTCGGCGCTGCTGAATTTGGTCCGGTGCGGCGGAGATAGGGTGGCCGGGGAGGTTAGGGACGTGGTGGCTTTTGGTGCGTTGGATGGGATTGCTGACGTGGAAGATCATGGAAGCGGGAAGGGGAAGATCAAGGCCACGGAATTGTTGAAGGTCATGCTCGGTGATGATCGGGGAAGCAATGGCAATGAATCTATGTTGAGTAGAGGTTCATCGTATGATTTTCCAGATTCTGAATGA 972 0.5782 MEVKRRAVRTLVSKLSSVSERTRIDALCELRLMSKQEPETRPMIAESGAIPYLAETLYSSSHPSQENAAATLLNLSITEKEPIMSTRGVLDAIAHVISNHNSSSSPAAVQSSAAAIHSLLSSVDDYRPVVGSKREIVYALVDILRCHVSSPPRTIKDALKALFAIALHPLNRATMVNFGAVPALFSLVVKDGRVGIVEDATAVIAQVAGCEESVEAFRKGSGFGVLADLLDLATGSSLRTKENAVSALLNLVRCGGDRVAGEVRDVVAFGALDGIADVEDHGSGKGKIKATELLKVMLGDDRGSNGNESMLSRGSSYDFPDSE 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4684g00003 323 Gene3D - 2 278 IPR011989 -
Gabi4684g00003 323 Pfam Armadillo/beta-catenin-like repeat 38 76 IPR000225 GO:0005515
Gabi4684g00003 323 SUPERFAMILY ARM repeat 5 297 IPR016024 -
Gabi4684g00003 323 MobiDBLite consensus disorder prediction 301 323 - -
Gabi4684g00003 323 SMART arm_5 168 209 IPR000225 GO:0005515
Gabi4684g00003 323 SMART arm_5 210 253 IPR000225 GO:0005515
Gabi4684g00003 323 SMART arm_5 37 77 IPR000225 GO:0005515
Gabi4684g00003 323 MobiDBLite consensus disorder prediction 305 323 - -
Gabi4684g00003 323 FunFam ARM repeat superfamily protein 2 302 - -
Gabi4684g00003 323 PANTHER U BOX DOMAIN-CONTAINING 7 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4684g00003 Gabi-Chr4684 50021 51424 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4684g00003 8 306 U-box Gene Family AT2G23140 34.333 9.73e-31 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4684g00003 - - gmx:100787115 481.485