Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4655g00073 ATGGTGAAGCAGTTTTCATTCCTCACTCACAAACTGCACGTGCTGACTTGCCTATTCTATTTCTCTCTCACAGTGACAGTGACAGGATCACCCTGTGGCCCCATGGATGTGATTGTGAAGCCCTCAACCCCTCTTGTTTCCTTTCTCGAACGCCTCCAAGAAACCGCATTCAATACCTTTGGCGAATCGCACTTCGATCCTAAAACCTACGTGGACTTGCCTCTCAAGTCCAACCTGTCTGTCACTGAGAACGCATTCCAGAAGCTTCCAAGGAACGCAAACGGGACCGTGTCGGTTGAGGATTTGAACCGTTTCATAAAAGCGTACTTCGAAGGTGCAGGGGATGATCTGGTGTACTTTGAACCAGAGGATTTCGTTCCCGAGCCAGAGGGTTTCTTGCCCAAGGTTAAGCACCCTGAGGTTAGGGCCTGGGCCCTGAAGGTCCATTCCCTTTGGAAAAACTTGACCCGGAAAATATCCGCTCGGGTCAAGACCCACCCACAGTTGCATACTCTTCTTCCTCTGCCAGGTTCTGTTGTGATTCCTGGGTCGCGCTTTCGTGAGGTTTATTACTGGGATTCCTACTGGGTAATTAGGGGCTTGCTGGTGAGTAAAATGTATAAGACTGCAACTGCAATTGTGACTAATCTCATTTCCTTAATACAAGAATATGGATTTGTGCTTAATGGTGCTAGAGCATACTACACTAACAGGAGTCAGCCTCCCCTTTTAAGCGCTATGATTTATGAGATATACTGTAGCACTGGTGATATAGAATTAGTTAAAAGATCTCTACCTGCACTACTAAAAGAGTATGAGTTTTGGAATTCAGATATACATAAAGTGAGCATTCGGGATGCTCAAGGTTGCACTCACACCTTAAATCGTTATTATGCAATGTGGAACAAACCCAGGCCAGAATCATCCATAATGGACCAGGAATCTGCCTCCAAGTTCTTGAATGTTTCAGAAAAACAACATTTTTACCTTGAACTGGCATCAGCTGCTGAATCTGGATGGGATTTCAGCACAAGATGGATGAGAGATCCACCTGATTTCACAACATTGGCCACAACATCTGTAGTACCTGTTGATTTAAATGCATTTCTACTTGGGATGGAACTTAATATTGCCTTCTTTGCAAAAGTTACTGGAGATAATAGCACTGCAAAGCACTTCCTGGAAATTTCTCATGTTAGAAAGAATGCAATGAACTCTGTTTTCTGGAATGTAAACAAGAAACAATGGCTTGATTACTGGCTCAGCAATGACACATGTGAGGAGGCTCAAGTTTGGGAAACCCTGCACCAGAATCAAAATATATTTGCTTCCAATTTTGTTCCTTTGTGGATGGAGCCATTTTACTCAGATACTTCGCTTGTGGGTGGTGTTGTTGAAAGTCTCAAAACTTCTGGCCTGCTTCGTGCTGCTGGAATTGCAACTTCTTTGAGTGATTCAGGACAACAGTGGGACTTCCCAAATGGTTGGGCCCCGCTTCAACACATGCTAGTTGAAGGCCTGATGAAATCAGGGTCGAAAGAAGCAAGATTATTGGCTGAGGAAATTGCCATCAGATGGATCACAACCAATTATATTGTTTACAAGAAAACTGGTGTAATGCATGAAAAGTTTGACGTGGAGCATTGTGGAGAATTTGGTGGTGGGGGTGAATATGTACCTCAGACTGGTTTTGGCTGGTCGAATGGTGTTGTGTTGGCATTCTTGGAGGAGTTTGGATGGCCTCAAGATCGGAATATAGAATGCTGA 1767 0.4414 MVKQFSFLTHKLHVLTCLFYFSLTVTVTGSPCGPMDVIVKPSTPLVSFLERLQETAFNTFGESHFDPKTYVDLPLKSNLSVTENAFQKLPRNANGTVSVEDLNRFIKAYFEGAGDDLVYFEPEDFVPEPEGFLPKVKHPEVRAWALKVHSLWKNLTRKISARVKTHPQLHTLLPLPGSVVIPGSRFREVYYWDSYWVIRGLLVSKMYKTATAIVTNLISLIQEYGFVLNGARAYYTNRSQPPLLSAMIYEIYCSTGDIELVKRSLPALLKEYEFWNSDIHKVSIRDAQGCTHTLNRYYAMWNKPRPESSIMDQESASKFLNVSEKQHFYLELASAAESGWDFSTRWMRDPPDFTTLATTSVVPVDLNAFLLGMELNIAFFAKVTGDNSTAKHFLEISHVRKNAMNSVFWNVNKKQWLDYWLSNDTCEEAQVWETLHQNQNIFASNFVPLWMEPFYSDTSLVGGVVESLKTSGLLRAAGIATSLSDSGQQWDFPNGWAPLQHMLVEGLMKSGSKEARLLAEEIAIRWITTNYIVYKKTGVMHEKFDVEHCGEFGGGGEYVPQTGFGWSNGVVLAFLEEFGWPQDRNIEC 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4655g00073 588 ProSitePatterns Trehalase signature 2. 489 498 IPR018232 GO:0004555|GO:0005991
Gabi4655g00073 588 PANTHER TREHALASE 41 586 IPR001661 GO:0004555|GO:0005991
Gabi4655g00073 588 Gene3D - 55 586 IPR012341 GO:0005975
Gabi4655g00073 588 PRINTS Glycosyl hydrolase family 37 signature 404 420 IPR001661 GO:0004555|GO:0005991
Gabi4655g00073 588 PRINTS Glycosyl hydrolase family 37 signature 562 575 IPR001661 GO:0004555|GO:0005991
Gabi4655g00073 588 PRINTS Glycosyl hydrolase family 37 signature 224 242 IPR001661 GO:0004555|GO:0005991
Gabi4655g00073 588 PRINTS Glycosyl hydrolase family 37 signature 482 498 IPR001661 GO:0004555|GO:0005991
Gabi4655g00073 588 PRINTS Glycosyl hydrolase family 37 signature 329 346 IPR001661 GO:0004555|GO:0005991
Gabi4655g00073 588 PRINTS Glycosyl hydrolase family 37 signature 361 378 IPR001661 GO:0004555|GO:0005991
Gabi4655g00073 588 PRINTS Glycosyl hydrolase family 37 signature 294 311 IPR001661 GO:0004555|GO:0005991
Gabi4655g00073 588 Pfam Trehalase 64 579 IPR001661 GO:0004555|GO:0005991
Gabi4655g00073 588 ProSiteProfiles EF-hand calcium-binding domain profile. 77 112 IPR002048 GO:0005509
Gabi4655g00073 588 SUPERFAMILY Six-hairpin glycosidases 62 581 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4655g00073 Gabi-Chr4655 655950 661157 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4655g00073 22 588 Trehalose Biosynthesis Gene Families AT4G24040 58.844 0.0 675
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4655g00073 K01194 - gmx:547539 980.704