Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4655g00058 ATGGCACTTAATGGCAGGCCTTGTTGGATCATATTCATTCTCTTATTATTATTATCATGTGTTGTTGCCTCTAATGGGGCTTCAGACACAGAATTGCTCCTCAAGGTGAAGGAGAACCTTGAAAACAATAATGGATTATCCTCATGGAACACATCATCATCTCCATGTTCAGGTAATCATGCCAATTGGAAAGGGGTTCTCTGCTATGAAGGAAAAGTATGGGGCTTGAAGCTTGAGAATATGGGTCTCAAAGGGGTCATTGATGTGGACTCTCTCAAGGAGTTACCATATCTTAGAACCATAAGCTTCATGAATAACAATTTTGATGGTGAATGGCCAGAAATAAACAAGCTAGTTGGTCTCAAGTCGATTTACCTCTCAAATAATAAGTTTTCTGGGGAGATTCCAGCTCAAACTTTTAAGGGCATGCAGTGGTTGAAGAAAATTTATTTGTCAAACAACAAGTTTGAGGGTGATATTCCATCTTCCCTGGCATTGTTGCCAAGGCTTATGGAGTTAAGGTTGGATGGAAACAAATTCAGTGGCCTCATTCCCCAATTTAAAGAGACCAAATTGAAATACATTACCATAGCTAATAATGACTTGCAGGGCGAAATACCATCCATCCTTAATAAGATGCCCGTTTCTTCCTTTTCTGGTAATGAAGCGTTATGTGGAGCCCCGTTGGAAGCATGTCATTCCAAGAAGCCTTCAATTGTTAGTATTTGTATTGTTGCCGTAGTTGTTGGTGTGGCACTGATTGTGATTGGAGCTGCAATAATATTCATCCTTCATCGAAGAAGAAAACGACAACCAACAACTTCGGTGGAGAATCCACCATCGAGTCTAAACAACAAAGGAGTGAGGGATGCAGGTGATGAAAGTCACAGGTCATCAAGATCAGTGAGTTCTTCCACCCATAGCAGAAGAGGTGACCACATGAAGTTAACTTTTATAAGGGATGACAGAGAGAAGTTTGATTTGCAAGAATTACTGAGAGCCTCTGCTGAGATTTTGGGCAGTGGTTGTTTCAGTTCTTCTTACAAGGCTTCTTTAATGAATGGCCCAAGTATAGTGGTGAAGAGGTTCAAGCAAATGAACAATGTAGGCAAGGAAGAGTTTCAAGAGCACATGAGAAGAATAGGAAGGTTGAGTCATCCTAATCTACATCCTCTTGTTGCTTACTATTACAGAAAGGAGGAGAAACTCTTAGTTACTGACTTTGTTCAGAATGGAAGCCTGGCTGTTCGCCTTCATGGACACCAAGCTCTAGGGGAACCAAGCCTTGATTGGCCAATCCGGTTGAAGATTGTGAAAGGCATAGCAAAAGGTCTTGAATATCTATACAAGGATATGCCAAGTCTAATAGCACCCCATGGAAATCTCAAATCCTCTAATGTTCTTCTGACTCAAACTTTTGAGCCCCTTCTCACTGACTATGGCTTAGTCCCTGTGATAAATCAAGAGATGGCTCAGGATATCATGGTGATCTACAAGTCTCCTGAGTATTTGCAACATGGAAGAATTTCAAAGAAAACTGACTTGTGGTGTCTTGGTATACTAATTCTGGAGATTCTAACTGGCAAGTTCCCTGCCAACTTTTTGCAACAGGGTAAAGGAAGTGAGGTGAGTTTGGCAAGTTGGGTGCATTCAATTGCCCCAGAAGAGTGGACTAAAGAAGTGTTTGATAAAGAAATGGGTGCAACCAAGAACAGTGAGGGAGAGATGGTGAAGCTTTTGAAGATTGCCTTGGATTGTTGTGAAGGGGATGTGGACAAGAGATGGGATTTGAAAGAAGCAGTAGAGAAAATCCAAGAGGTAAAGGAGAGGGATCTTGATGAGAGTTTTTATACTTCTTATGCTAGCGAAGCAGACATGAACTCTTCAAGATGA 1893 0.4126 MALNGRPCWIIFILLLLLSCVVASNGASDTELLLKVKENLENNNGLSSWNTSSSPCSGNHANWKGVLCYEGKVWGLKLENMGLKGVIDVDSLKELPYLRTISFMNNNFDGEWPEINKLVGLKSIYLSNNKFSGEIPAQTFKGMQWLKKIYLSNNKFEGDIPSSLALLPRLMELRLDGNKFSGLIPQFKETKLKYITIANNDLQGEIPSILNKMPVSSFSGNEALCGAPLEACHSKKPSIVSICIVAVVVGVALIVIGAAIIFILHRRRKRQPTTSVENPPSSLNNKGVRDAGDESHRSSRSVSSSTHSRRGDHMKLTFIRDDREKFDLQELLRASAEILGSGCFSSSYKASLMNGPSIVVKRFKQMNNVGKEEFQEHMRRIGRLSHPNLHPLVAYYYRKEEKLLVTDFVQNGSLAVRLHGHQALGEPSLDWPIRLKIVKGIAKGLEYLYKDMPSLIAPHGNLKSSNVLLTQTFEPLLTDYGLVPVINQEMAQDIMVIYKSPEYLQHGRISKKTDLWCLGILILEILTGKFPANFLQQGKGSEVSLASWVHSIAPEEWTKEVFDKEMGATKNSEGEMVKLLKIALDCCEGDVDKRWDLKEAVEKIQEVKERDLDESFYTSYASEADMNSSR 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4655g00058 630 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Gabi4655g00058 630 Pfam Leucine rich repeat N-terminal domain 28 68 IPR013210 -
Gabi4655g00058 630 ProSiteProfiles Protein kinase domain profile. 333 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4655g00058 630 CDD TM_EGFR-like 233 271 - -
Gabi4655g00058 630 Pfam Leucine rich repeat 120 180 IPR001611 GO:0005515
Gabi4655g00058 630 Gene3D Ribonuclease Inhibitor 28 142 IPR032675 -
Gabi4655g00058 630 Gene3D Phosphorylase Kinase; domain 1 298 408 - -
Gabi4655g00058 630 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 14 609 IPR046959 -
Gabi4655g00058 630 SUPERFAMILY L domain-like 54 214 - -
Gabi4655g00058 630 Gene3D Ribonuclease Inhibitor 143 234 IPR032675 -
Gabi4655g00058 630 FunFam Pollen receptor-like kinase 1 409 618 - -
Gabi4655g00058 630 Gene3D Transferase(Phosphotransferase) domain 1 409 624 - -
Gabi4655g00058 630 MobiDBLite consensus disorder prediction 271 309 - -
Gabi4655g00058 630 SUPERFAMILY Protein kinase-like (PK-like) 337 606 IPR011009 -
Gabi4655g00058 630 Pfam Protein tyrosine and serine/threonine kinase 337 603 IPR001245 GO:0004672|GO:0006468
Gabi4655g00058 630 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 89 184 - -
Gabi4655g00058 630 FunFam pollen receptor-like kinase 1 302 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4655g00058 Gabi-Chr4655 463774 466540 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4655g00058 10 630 Receptor kinase-like Gene Family AT5G35390 55.008 0.0 680
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gabi4655g00058 Pkinase 2e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4655g00058 - - gmx:100804368 942.184