Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4655g00057 ATGTCATCAAGGTTGATTTCAGAGAAGAAACTAGGCGCAGGACGTGTGGTGGCAGTGGCAATTGAGAATAACAAAACAAGCCAATTTGCAGCCAAATGGGCAGTTGACAATCTTCTTCCTAAAGACCAATATCTCTTATTAATCCATGTTAGACAAAAAGCTTCTTCCATTCCTACACCAACGGGAAACCATGTACCTGTTGATGGCAACGAGGATGTGGCTAAAGCTTACACTCAACAAATAGATAACGAATCCAAGGAGCTTTTCGCTTCATTTCGTGTCTTCTGCAATAGAAAGAGTATACAATGCAAAGAAATCTTGTTGGAGGATATGGATATATCCAAGGCATTAATGGAAGCTATTTCATCGTATTCCATTGAGCTTATGGTACTTGGGGCACCATCAAGGAATGGTCTTGTCAGGACATCGGATGTTCCAGGCCTTGTGTCTAAAGGGGCACCGCCATTCTGCACTGTGTACATTATTTCAAAAGGGAAAATCTCAAGTGTGCGAACTGCTACTGCTACATTAACTTCTAAACCCCGTAACAATATAGTGGTCCCGCAGCCTCAGCCTCAGCCTCAGCTTCATCCTCAGCCTCAGCCTCACCTTCAACTAAGTCCTGACAGAATGGATGCATATCTAATGCGCAACCATCCACCACGACCATCAGCAGAGAAGCCAGCATTCGTTGCCCGCCAGCTAATGGATGAAGAGGAAATCAAATCACCATTCACAAGAGTTGGTAGACCATCCCACAGATCATACGAGTCCTCAATCCCTGACTCTGATATTTCATTCGTGAGCAGTGGAAGGCCAAGTATTGATAGGATGTTCCCTTCATTGTATGAAGAAATGGACTCTGGAATGACCCCTCGGGTTTCAACAGGCTCAGATTTTGATAGCAGAAGCTACGGTTCATCTTTCTCAGGAGCTAAGTCAATTATTGATCAAGCTGATTACTCGTTCACTTCCCAAGACAGTGGGACGTCCATGTCACCAACATCAAGATTATCAAATTCGGATGAAGTGGAAGCTGAAATGAGGAGACTGAAGCTAGAACTGAAGCAGACAATGGAAATGTACAGTACAGCTTGCAAGGAAGCTCTGTCAGCAAAGCAAAAGACAATGGAGCTTCAGCGTTGGAAAATGGAAGAACAAAGGAAATTGGAAGAGGCAAAAATTGCTGAAGAATCAGCATTGGCAGTAGCTGAGAAGGAGAGAGCAAAATGTAAAGCTGCCATGGAGGCAGCGGACGCTTCTAGAAAAATAGCAGAGTTGGAAGCACATAAAAGAATGAATTCAGAATCTGAGCATAGGAAGAAGACAGGAGATACTGTCTCACATGTTCAAGCCAGGTACAGAAAATACTCTATTGAGGAAATAGAAGAAGCAACAAACTTCTTTTCCAACTCTCTCAAGATCGGCGAAGGAGGGTATGGGCCAGTCTACAGGTGTGAACTAGATCACACGCCAGTTGCAGTGAAAGTGTTAAAACCAGATGCAGCTCAAGGACGGTCACAGTTTCAGCAGGAGGTTGAAGTGCTAAGTTGCATAAGGCATCCAAACATGGTTCTCCTCCTTGGAGCATGCCCAGAGTTTGGTTGCCTAGTGTATGAATACATGGCTAATGGAAGCTTGGATGATTGCCTATTCCGGAGAGGTAATAACTCACCGGTTCTTCCCTGGCAGCTAAGATTCCGAATAGCTGCAGAGATTGCCACTGGCCTCCTTTTCCTTCATCAGGCAAAACCAGAACCACTGGTGCACCGTGACTTAAAACCAGGAAACATTTTGCTTGACCGTAACTTTGTGAGCAAAATCAGTGATGTGGGATTGGCCAGGCTTGTCCCTCCTTCAGTTGCAGACACTGTGACACAGTATCGCATGACATCAACTGCTGGAACTTTCTGTTACATTGACCCTGAGTATCAGCAAACGGGCATGCTAGGAATCAAGTCTGATATTTACTCACTGGGAATCATGCTTCTACAGATAGTTACAGCAAAGCCACCAATGGGTTTGACTCATCATGTTAGTAGAGCTATTGAGAAGGGAACTTTTGCTGAGATGCTTGACCCTGCTGTTGAGGACTGGCCAGTTGAACATGCCATGCACTTTGCCAAGCTTGCCCTGCAGTGTGCAGAAATGAGAAGAAAAGATAGACCTGATCTTGGAAAAGTTGTATTACCTGAGCTCAATAAGCTCAGAGATTTTGCTGAAGAATACATGCCCATGATGATGAGGTTCGGCGGATTCGCTCCCAGAAATAACAACAATTACTCACGCTCCACATTTTCCTCAAATCAAGATTCTATGACTGATTCTCAGTCGCTGTCTGGAATCTCCGGATATGAGAGCCGCTCAAGCTCATCCTCAATGGGCAAAATGTGA 2394 0.4465 MSSRLISEKKLGAGRVVAVAIENNKTSQFAAKWAVDNLLPKDQYLLLIHVRQKASSIPTPTGNHVPVDGNEDVAKAYTQQIDNESKELFASFRVFCNRKSIQCKEILLEDMDISKALMEAISSYSIELMVLGAPSRNGLVRTSDVPGLVSKGAPPFCTVYIISKGKISSVRTATATLTSKPRNNIVVPQPQPQPQLHPQPQPHLQLSPDRMDAYLMRNHPPRPSAEKPAFVARQLMDEEEIKSPFTRVGRPSHRSYESSIPDSDISFVSSGRPSIDRMFPSLYEEMDSGMTPRVSTGSDFDSRSYGSSFSGAKSIIDQADYSFTSQDSGTSMSPTSRLSNSDEVEAEMRRLKLELKQTMEMYSTACKEALSAKQKTMELQRWKMEEQRKLEEAKIAEESALAVAEKERAKCKAAMEAADASRKIAELEAHKRMNSESEHRKKTGDTVSHVQARYRKYSIEEIEEATNFFSNSLKIGEGGYGPVYRCELDHTPVAVKVLKPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPEFGCLVYEYMANGSLDDCLFRRGNNSPVLPWQLRFRIAAEIATGLLFLHQAKPEPLVHRDLKPGNILLDRNFVSKISDVGLARLVPPSVADTVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDIYSLGIMLLQIVTAKPPMGLTHHVSRAIEKGTFAEMLDPAVEDWPVEHAMHFAKLALQCAEMRRKDRPDLGKVVLPELNKLRDFAEEYMPMMMRFGGFAPRNNNNYSRSTFSSNQDSMTDSQSLSGISGYESRSSSSSMGKM 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4655g00057 797 Pfam Protein kinase domain 472 725 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4655g00057 797 MobiDBLite consensus disorder prediction 324 341 - -
Gabi4655g00057 797 SMART serkin_6 469 740 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4655g00057 797 MobiDBLite consensus disorder prediction 761 797 - -
Gabi4655g00057 797 FunFam U-box domain-containing protein 51 542 743 - -
Gabi4655g00057 797 ProSitePatterns Serine/Threonine protein kinases active-site signature. 588 600 IPR008271 GO:0004672|GO:0006468
Gabi4655g00057 797 MobiDBLite consensus disorder prediction 187 201 - -
Gabi4655g00057 797 Coils Coil 387 407 - -
Gabi4655g00057 797 ProSiteProfiles Protein kinase domain profile. 469 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4655g00057 797 Gene3D HUPs 15 150 IPR014729 -
Gabi4655g00057 797 CDD STK_N 16 165 - -
Gabi4655g00057 797 Gene3D Phosphorylase Kinase; domain 1 447 541 - -
Gabi4655g00057 797 Gene3D Transferase(Phosphotransferase) domain 1 542 746 - -
Gabi4655g00057 797 Coils Coil 341 361 - -
Gabi4655g00057 797 MobiDBLite consensus disorder prediction 180 206 - -
Gabi4655g00057 797 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 17 141 - -
Gabi4655g00057 797 MobiDBLite consensus disorder prediction 324 343 - -
Gabi4655g00057 797 SUPERFAMILY Protein kinase-like (PK-like) 449 729 IPR011009 -
Gabi4655g00057 797 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 441 541 - -
Gabi4655g00057 797 PANTHER OS02G0152300 PROTEIN 16 778 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4655g00057 Gabi-Chr4655 456066 460697 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4655g00057 17 749 Receptor kinase-like Gene Family AT5G35380 57.123 0.0 749
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Gabi4655g00057 Pkinase 2.2e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4655g00057 - - gmx:100803837 1223.76