Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4655g00049 ATGGAAGGCTATGGAAAGTACAAAACAATGACGGAGAAGGGAGAAAACGGAGTGATTGTCCCATCGTTTTCTTCTTCGCGCGAGGGATTCCGCGCTCATGGTGGAAAAAGCGTTTTGACAGTTGCTGCTGCTAGAAAGATGTACCAGAGAGAGAAGGTCAATGCTTCTTCATCTTCAAGTGACGACATGGATGCAACCGTTTATGGTAGGAAAAAGAAAAAACGTAAATGTCTTCAGGAGTTGTTTACAGCAGATTACGTTGTAAACAATGTTTTACGGAAGGATGGCCCTTCTCTTGGTCAGGAATTTGATTCATTTCCTTCTGGACCCAAAAAGCACACTCCTGCTTGTCAAGAGGAACTAGGGCCCACCAAAAGGAGGAAGGTTTCCAAGAGTGCAACTCGAAGTCACCCTGATTGTAATATGAAAGCACCTGTGAAGAAACATGGTATTGGCAAAGGTCTGATGACAGTTTGGAGGGCAACAAATCCTGAAGCTGGACGCCTTCCAGTGAGTTTTGGTTTTGCTGACCGAGAAGTTCGTCTAATCTCGAATTCCATAGCACAGAAACCGGTCTATGAGAACAACAGGTCTCGGGAAACTGTAATTATGAATGGAGAATTGAACCAATATGTGACTCAGAACCAGTCACTGGTGGAAAAATGTGAACTTGCTTTGGATAGTGCAACATATGACGAGGGAGTTGATCGTTTTTCAATGTTAATCGATGATGAAGAGCTAGAATTGAGAGAGCTACAAGAAGGAACTGATCTGCTTATGTGTTCTGATCATTTTGCTGCCTGTGGAATGCTTGGTTGCTCACTTTGTAAAGATGTGCTAGTTAAGTTCCCCCCAGATAGTGTCAAGATGAAGAAACCTATACGTTTGCAACCTTGGGACTCCTCTCCAGAAATTGTGAAGAAATTATTTAAGGTTTTCCATTTCCTTTATACATATGCTGTAGTTGTTGATATATGTCCCTTCACTCTTGATGAGTTTGTTCAATCATTTCATGATAAGGACTCGATGCTACTTGGAAAGATTCATGTGGCTCTTCTCACACTTCTTCTATCTGACATTGAAATGGAGCTTACTGATGGGTTTTTACCTCATTTAAATAAGTCATGCAATTTTCTTGCATTGCTTCACTCGGTTGAAAGTCAGGAATATTCCCTGAACTTATGGAAAAGATCTCTAAATCCTCTTACTTGGATTGAAATACTCCGGCAAGTGCTGGTTGCTTCTGGATTTGGTTCAAAGCAAGGTGCCTTACGAAGAGAGGCCCTTAGCAAGGAATTGAATCTTTTTGTAAACTATGGAGTATGCCCTGGCACCTTGAAGGGTGAATTGTTTACAATCTTGTCAGAGCAAGGAAACAATGGATGCAAAGTATCTGAGCTGGCAAAGTCAAAGCAGATTATTGAATTAAACCTTGTCAGCACAACAGAGGAACTGGAGTCTTTAATATTTTCCACACTTTCAAGTGATATTACTTTATTTGAAAAGATTTCATCATCTGCATATCGACTGCGTATGAGCACTGTTATGAAGGACAATGATGAATGCCAGTCAGATATGGAGGACTCTGGGAGTGTTGATGATGAACTTAACGACAGTGATACGTGTAGCAGTGGCGATGATTTTGAAACTGATTCAAGAAACTCCAATATAAGAAAATTGAAGCGTGCAAACAGTCAAAAAACAAAAAATAATATGTTGAAAGTATACACTGAAATCGACGAGAGCCATCCGGGAGAAGTGTGGTTGTTAGGACTGATGGAGAGTGAATATTCTGATTTGAACATTGAAGAAAAATTGAATGCATTGGCGGCTCTAACTGATCTTCTTTCATCTGGATCCAGCATCAGGTTGAAGGATCCAATAAAAGATACCGCCAATTGCAATTCTGGCGTCCAGTTATGTGGTTCTGGAGCAAAAATAAAGAGATCAGTAGTAAAAAAGCCGGTTCCATTTTGGAACCAGATTGGACAAATGCAATCTGCTAAAGAAGTGCCCTCAACTTCTCATCCCTGTCCAGTAGATTCCTCATCATTATTCTCAAAATTTCATAGTCATGAGGCATCCTTTGAGAATGGAAAAGGTTCAACTGATTCACACCCCATTCAGTCAGTGTTATTGGGATCTGATCGTAGGTACAATAGATATTGGCTTTTCTTGGGCCCTTGTGATGCAGATGATCCTGGCCACCGGAGGGTTTACTTTGAATCTTCCGAAGATGGTCACTGGGAGGTGATTGATACCGAAGAGGCCTTGTGTACCTTGTTGTCAGTTTTGGATGATAGAGGGAAACGGGAGGCTCTTCTTCTTGAATCTTTGGAGAGGCGGCAAACATCTCTATGCAGATCTATGTCCAGGATTAAGGTTAATAGTAATGGTATGGGGAATATGTCACATTCTGATCAATCTGAGCTGGATATGGTCACAGAAGATAGTTATTCTCCAGTATCTGATGTAGACAACCTGAACCTGACTGAGACTGCCAAGGGCTCCTTGCCATCAGCTGGGGCTGTGGTAATTGAAGCCGGAAAGAAGGGGGAGGAACAAGTGCAAAAATGGTTCCGTGTTCAAGAATATGATTCTTGGATTTGGAATTCCTTTTATTTAGATCTCAATGTTGTAAAATATGGTAGAAGGTCTTATCTTGACTCTCTAGCAAGATGTAGGAGTTGTCACGATCTATACTGGAGAGATGAGAGACACTGTAAAATCTGCCATATGACATTTGAGCTTGACTTTGATCTAGAAGAAAGATATGCAATTCACCTAGCCACATGCAGGGAGAAAGAAGACAGCAATACATTTCCAAATCATAAAGTCTTATCATCACGGATTCAATCACTGAAAGCTGCAATTTATGCTATTGAGTCTGTTATGCCTGAAGATGCCCTGGTTGGTGCTTGGAGGAAGTCTGCTCATAAGCTATGGATCAAACGACTCAGACGCACCTCAACTTTAGTGGAGCTTTTTCAGGTTCTTGCTGATTTTGTTGGTGCCATCAACGAGGACTGGTTGTTTCAATGCAAATTTCTTGATGGTGTGGTTGAAGAAATCATTGCATCTTTTGCATCTATGCCCCATACATCATCTGCCCTTGCTTTGTGGTTAGTGAAGTTAGATGCCATAATTGCTCCCTACCTGGAAAGGGCCCATCCTCAGAAGAAGCAGGGAATCAGTAAGCATGGTCCTTGCTGA 3213 0.4149 MEGYGKYKTMTEKGENGVIVPSFSSSREGFRAHGGKSVLTVAAARKMYQREKVNASSSSSDDMDATVYGRKKKKRKCLQELFTADYVVNNVLRKDGPSLGQEFDSFPSGPKKHTPACQEELGPTKRRKVSKSATRSHPDCNMKAPVKKHGIGKGLMTVWRATNPEAGRLPVSFGFADREVRLISNSIAQKPVYENNRSRETVIMNGELNQYVTQNQSLVEKCELALDSATYDEGVDRFSMLIDDEELELRELQEGTDLLMCSDHFAACGMLGCSLCKDVLVKFPPDSVKMKKPIRLQPWDSSPEIVKKLFKVFHFLYTYAVVVDICPFTLDEFVQSFHDKDSMLLGKIHVALLTLLLSDIEMELTDGFLPHLNKSCNFLALLHSVESQEYSLNLWKRSLNPLTWIEILRQVLVASGFGSKQGALRREALSKELNLFVNYGVCPGTLKGELFTILSEQGNNGCKVSELAKSKQIIELNLVSTTEELESLIFSTLSSDITLFEKISSSAYRLRMSTVMKDNDECQSDMEDSGSVDDELNDSDTCSSGDDFETDSRNSNIRKLKRANSQKTKNNMLKVYTEIDESHPGEVWLLGLMESEYSDLNIEEKLNALAALTDLLSSGSSIRLKDPIKDTANCNSGVQLCGSGAKIKRSVVKKPVPFWNQIGQMQSAKEVPSTSHPCPVDSSSLFSKFHSHEASFENGKGSTDSHPIQSVLLGSDRRYNRYWLFLGPCDADDPGHRRVYFESSEDGHWEVIDTEEALCTLLSVLDDRGKREALLLESLERRQTSLCRSMSRIKVNSNGMGNMSHSDQSELDMVTEDSYSPVSDVDNLNLTETAKGSLPSAGAVVIEAGKKGEEQVQKWFRVQEYDSWIWNSFYLDLNVVKYGRRSYLDSLARCRSCHDLYWRDERHCKICHMTFELDFDLEERYAIHLATCREKEDSNTFPNHKVLSSRIQSLKAAIYAIESVMPEDALVGAWRKSAHKLWIKRLRRTSTLVELFQVLADFVGAINEDWLFQCKFLDGVVEEIIASFASMPHTSSALALWLVKLDAIIAPYLERAHPQKKQGISKHGPC 1070
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4655g00049 1070 MobiDBLite consensus disorder prediction 99 147 - -
Gabi4655g00049 1070 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 709 782 IPR028941 -
Gabi4655g00049 1070 SMART testlast3 303 362 IPR018501 -
Gabi4655g00049 1070 Pfam DDT domain 306 359 IPR018501 -
Gabi4655g00049 1070 PANTHER HOMEOBOX PROTEIN SIX 207 1057 - -
Gabi4655g00049 1070 MobiDBLite consensus disorder prediction 525 545 - -
Gabi4655g00049 1070 ProSiteProfiles DDT domain profile. 303 362 IPR018501 -
Gabi4655g00049 1070 MobiDBLite consensus disorder prediction 520 554 - -
Gabi4655g00049 1070 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 584 623 IPR028942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4655g00049 Gabi-Chr4655 379575 391012 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4655g00049 223 1059 Homeobox Transcription Factor Family AT1G28420 26.693 1.43e-73 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Gabi4655g00049 WSD 3.3e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4655g00049 - - gmx:100802783 1663.28