Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4655g00043 ATGGCAGGTGCGATGAAGAATGTCGATAAGATTCGCCAAATCGTGCGTCTCAAGCAGATACTGATACGGTGGAAGCATATGAGCCTCCGCCGTCGCTCCTCCGAACCCAAGCCATGTGCCACCACAACTCGACGACCACCCTCTGGATTCGTCTTTGTCTATGTTGGACCAGAACGCAAGCGTTTTTCAATTCCTGCGCGGTTCCTTAACCTCCCTATATTCGCGGGTCTCCTCGAGGAAACCGAGGAGGAGTTTGGCCTCCGAGGTAACTGTGGTTTGGTTCTGCCTTGCCAAGTTCCTTTCTTCACAGACATCGTCAAGCATCTCCAGAAAGATGAGCATAAGTACGGAAATTTTTCTCTCCAAGAGTTCGTGAATATGATTTCTGATTTGGGTTCTGATTCTTGCAAGGAAAACGTCATTGCTTTTGCTCCTCTGTTGCAGAAAGCAAAGGTTTAA 459 0.4837 MAGAMKNVDKIRQIVRLKQILIRWKHMSLRRRSSEPKPCATTTRRPPSGFVFVYVGPERKRFSIPARFLNLPIFAGLLEETEEEFGLRGNCGLVLPCQVPFFTDIVKHLQKDEHKYGNFSLQEFVNMISDLGSDSCKENVIAFAPLLQKAKV 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4655g00043 152 Pfam Auxin responsive protein 17 108 IPR003676 GO:0009733
Gabi4655g00043 152 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 35 104 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4655g00043 Gabi-Chr4655 325270 326106 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4655g00043 11 110 Calmodulin-binding Proteins AT3G43120 33.333 2.10e-17 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4655g00043 K14488 - gmx:100797463 223.787