Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4655g00033 ATGGGAAGGAAGTGCTCACATTGTGGAACCATAGGACATAACTCTAGGACCTGCACATCTTTCAGAGGAACTAGTTTCGTTGGACTTCGCCTCTTCGGAGTGCAACTAGACATATCCTCATCTAATTGTGTTACCATCAAGAAAAGCTTTAGCATGGACTCCATACCCTCATCTTCCTCTCCATCTTCCTCATTTTCTTCATCAAGATTAACCATTGATGACAGAACCTCTATTGGGTATCTCTCAGATGGTCTCATCGCTCGAGCCCAAGAGAGAAAGAAAGGAGTTCCATGGACAGAAGAGGAGCACCGAATATTCCTTATTGGACTTGAGAAGCTGGGAAAAGGTGATTGGAGGGGTATCTCTAGAAACTTTGTGACAACAAGAACCCCAACACAAGTAGCCAGCCATGCTCAGAAATACTTTCTGAGACTGGCAACAATGAATAAGAAGAAGCGACGTTCAAGTCTCTTTGATTTGGTTGGTAGCAGCAACATCAACACAAAAGGTCATCATCCTATTACAAATTCTAATTGCAAGCCAGGAGATTCAGTTGAGAAAGATGCCACTTTGTCATTGTTAGGGCGCATAGCCTGCTTTCAACAAGAAACCAAATCAAATAAGAAAGAAGATTCTGATAGTTACTATGAAGTTGAACCAGCTGCAGAACATGAAGGTGTGGCTATGTGGATACATCCCCAGATGAAATCTTCAAATGTGGTAGCAGCGCCTGATCTGGAGCTAAGTCTTGCAGCCCCTAAGGCTAAAACCATGGAACAAAATAATTCATCCACTGGTTCATTCCTGCTTGGACCAATTAGCGTTACTTAA 831 0.4272 MGRKCSHCGTIGHNSRTCTSFRGTSFVGLRLFGVQLDISSSNCVTIKKSFSMDSIPSSSSPSSSFSSSRLTIDDRTSIGYLSDGLIARAQERKKGVPWTEEEHRIFLIGLEKLGKGDWRGISRNFVTTRTPTQVASHAQKYFLRLATMNKKKRRSSLFDLVGSSNINTKGHHPITNSNCKPGDSVEKDATLSLLGRIACFQQETKSNKKEDSDSYYEVEPAAEHEGVAMWIHPQMKSSNVVAAPDLELSLAAPKAKTMEQNNSSTGSFLLGPISVT 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4655g00033 276 PANTHER TRANSCRIPTION FACTOR KUA1 3 235 - -
Gabi4655g00033 276 NCBIfam myb-like DNA-binding domain, SHAQKYF class 93 144 IPR006447 GO:0003677
Gabi4655g00033 276 CDD SANT 97 142 IPR001005 -
Gabi4655g00033 276 Gene3D - 96 148 - -
Gabi4655g00033 276 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 90 146 IPR017930 -
Gabi4655g00033 276 ProSiteProfiles Myb-like domain profile. 90 142 IPR001005 -
Gabi4655g00033 276 SUPERFAMILY Homeodomain-like 91 146 IPR009057 -
Gabi4655g00033 276 ProSiteProfiles SANT domain profile. 98 146 IPR017884 -
Gabi4655g00033 276 SMART sant 94 144 IPR001005 -
Gabi4655g00033 276 MobiDBLite consensus disorder prediction 257 276 - -
Gabi4655g00033 276 FunFam transcription factor MYB1R1 96 147 - -
Gabi4655g00033 276 Pfam Myb-like DNA-binding domain 97 142 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4655g00033 Gabi-Chr4655 242089 243510 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gabi4655g00033 Myb_DNA-binding 1.2e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4655g00033 - - gmx:778052 323.168