Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4655g00017 ATGACCGCAAATCCCGTTATACTGCAGAGTGAGAACTTGACCAAGTATATACTGGAGACCACCGTTTACCCAAGAGAACCAGAGACTCTGAAAGAGATTAGGAATGCCACAGCAAGCCACCCTATGGGCTTCATGGGCACAGCACCTGATGCGGGTCAGCTAATGGCCTTGCTCTTGAAACTTATGAATGCTAAGAAGACAATTGAAGTGGGAGTTTTCACTGGATACTCTCTTCTCCTCACTGCACTTAACATTCCTGAAGATGGAAAGGTAATAGCCATAGATCCAGACAGAAAAGCTTATGAGATAGGACTGCCATTCATTAAAAAGGCAGGTGTTGAACACAAGATTGACTTCATGGAATCTCCAGCTTTACCAGTTCTTGATGAACTCTTACAAGATCCTTCAAATGAGGGAACTTTTGATTTTGCCTTTGTCGATGCTGATAAACATAATTATTGGAATTATCACGAGCGGCTTCTTAAACTGATTAAGATTGGTGGGTTAATTATCTACGATAACACCCTCTGGGGTGGAAGTGTTGCCAAGCCTGAAGAGGATGTTCCAGCACCCAAAAGAGGACCCAGGCAGGCTGCACTGTCTTTCAACAAAGAAATTGCAAACGATTCCCGCGTTGAAATTTCCCTTGCTTCAATCGGTGATGGGTTCACTATCTGCAGGCGTGCTCCCTGA 693 0.443 MTANPVILQSENLTKYILETTVYPREPETLKEIRNATASHPMGFMGTAPDAGQLMALLLKLMNAKKTIEVGVFTGYSLLLTALNIPEDGKVIAIDPDRKAYEIGLPFIKKAGVEHKIDFMESPALPVLDELLQDPSNEGTFDFAFVDADKHNYWNYHERLLKLIKIGGLIIYDNTLWGGSVAKPEEDVPAPKRGPRQAALSFNKEIANDSRVEISLASIGDGFTICRRAP 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4655g00017 230 Gene3D Vaccinia Virus protein VP39 2 229 IPR029063 -
Gabi4655g00017 230 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 6 229 IPR002935 GO:0008171
Gabi4655g00017 230 CDD AdoMet_MTases 68 172 - -
Gabi4655g00017 230 PANTHER O-METHYLTRANSFERASE-RELATED 4 228 - -
Gabi4655g00017 230 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 10 228 IPR029063 -
Gabi4655g00017 230 Pfam O-methyltransferase 20 228 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4655g00017 Gabi-Chr4655 101617 103355 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4655g00017 7 228 Monolignol Biosynthesis Gene Families AT4G26220 69.820 1.62e-116 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4655g00017 K00588 - gmx:100780516 385.571