Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4655g00015 ATGGAAAACTTACCAAAGCCTAAAATGACCGCAAATCCCGTTATACTGCAGAGTGAGAACTTGACCAAGTATATACTGGAGACCACCGTTTACCCAAGAGAACCAGAGACTCTGAAAGAGATTAGGAATGCCACAGCAAGCCACCCTATGGGCTTCATGGGCACAGCACCTGATGCGGGTCAGCTAATGGCCTTGCTCTTGAAACTTATGAATGCTAAGAAGACAATTGAAGTGGGAGTTTTCACTGGATACTCTCTTCTCCTCACTGCACTTAACATTCCTGAAGATGGAAAGGTAATAGCCATAGATCCAGACAGAAAAGCTTATGAGATAGGACTGCCATTCATTAAAAAGGCAGGTGTTGAACACAAGATTGACTTCATGGAATCTCCAGCTTTACCAGTTCTTGATGAACTCTTACAAGATGGAACTTTTGATTTTGCCTTTGTCGATGCTGATAAACATAATTATTGGAATTATCACGAGCGGCTTCTTAAACTGATTAAGATTGGTGGGTTAATTATCTACGATAACACCCTCTGGGGTGGAAGTGTTGCCAAGCCTGAAGAGGATGTTCCAGCACCCAAAAGAGGACCCAGGCAGGCTGCACTGTCTTTCAACAAAGAAATTGCAAACGATTCCCGCGTTGAAATTTCCCTTGCTTCAATCGGTGATGGGTTCACTATCTGCAGGCGTGCTCCCTGA 705 0.4397 MENLPKPKMTANPVILQSENLTKYILETTVYPREPETLKEIRNATASHPMGFMGTAPDAGQLMALLLKLMNAKKTIEVGVFTGYSLLLTALNIPEDGKVIAIDPDRKAYEIGLPFIKKAGVEHKIDFMESPALPVLDELLQDGTFDFAFVDADKHNYWNYHERLLKLIKIGGLIIYDNTLWGGSVAKPEEDVPAPKRGPRQAALSFNKEIANDSRVEISLASIGDGFTICRRAP 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4655g00015 234 CDD AdoMet_MTases 76 176 - -
Gabi4655g00015 234 PANTHER O-METHYLTRANSFERASE-RELATED 11 232 - -
Gabi4655g00015 234 Pfam O-methyltransferase 28 232 IPR002935 GO:0008171
Gabi4655g00015 234 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 18 232 IPR029063 -
Gabi4655g00015 234 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 14 233 IPR002935 GO:0008171
Gabi4655g00015 234 Gene3D Vaccinia Virus protein VP39 6 233 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4655g00015 Gabi-Chr4655 101617 103527 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4655g00015 15 232 Monolignol Biosynthesis Gene Families AT4G26220 68.919 6.68e-113 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4655g00015 K00588 - gmx:100792717 372.859