Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4651g00093 ATGGAACTCAAAAAGGACAAGCTTGTCAGGTTCTACACAGAGTCATCATCCACATACAAAGTTTCATCGTCTTCCTTGCTCAAAACAAGCAATGCACTGCCATGGGGTAAGAACAGATTTGCTGAAACATTTAGAATTGAGGGATCTAAGGTATTCCTGGAGGATCATGATGCATGGCGTAAAACGATACTTGACCCGGGTAGTGAGATTGTGTTGAAATGGAACCGTGTCTTCATCATTTCATGCTTGGTGGCTCTTTTTTTAGATCCTTTGTACTTTTACTTGCCCAGTGTGAGAGGAAATGCTGGGTCTTCTTCATGCGTGAGGACTGACACAGATTTAAGGATTGTTGTCACCTTTCTTCGCACTATTGCAGATATCTTTTATCTATTGCATCTGTTAATTAAGTTCAGGACAGCTTATGTGGCACCAAGCTCACGGGTATTTGGTAGGGGTGAACTTGTCATGGACCCCAAGAAAATTGCAACAAGATACATTAAATCTGATTTCTTCATTGATTTGATTGCCACACTACCTTTACCACAGGTCATCTGGTTTATTATACCGGCAACAAGAAGCCCTCAAACAAGTCACAAGAATAATGCTCTTGCGTTGATTGTTCTGCTCCAATATGTTCCAAGATTATATTTGATATTTCCATTAAGTTCTCAAATAATCAAAGCAACAGGAGTGGTTACGAAGACTGCCTGGGCAGGAGCTGCATATAATCTGCTATTGTATATGCTAGCTAGCCATGTTTTAGGGGCAGCATGGTATCTTCTGTCTGTGGACCGATATACCACTTGTTGGAAATCCATCTGCAAAAAGGAAACTAACCCTGAAAACTGTTTTCTTTACCTGGACTGCAGTTCTTTGAATATTAAGCAGCGCATGATATGGGCAAATAGTACAAATGTTTTTAACAGCTGTGATCCCAATAAAGATATTGATTTCAATTATGGCATATTTGCAAATGCAATGACAAAGAATGTTGTCTCTTCATACTTTTTCCCAAAATACTTTTATTGTTTATGGTGGGGATTGCAGCAATTAAGTTCTTATGGGCAGAACCTGTCTACCAGCACTTTTATTGGAGAGACGTCATTTTCTATTCTCATTGCCATCTTGGGTCTTGTTTTATTTGCCCATTTGATTGGGAACATGCAGACATATTTGCAATCAATCACTCTAAGGCTTGAGGAGTGGAGGCTTAGACGAAGAGACACTGAGGAGTGGATGAGGCATCGCCAACTCCCTGAAGATCTTAAACGTCGTGTTCAACGATTTGTTCAATATAAATGGGTTGCAACTCGAGGGGTTGAGGAAGAAGCCATTCTACATGGATTACCTGCTGATCTTCGTCGTGATATCCAACGCCACCTATGCTTGGATCTCGTTCGACGAGTTCCCTTCTTCTCACAGATGGATGATCAGCTGCTTGACGCAATATGTGAGCGGCTGGTGTCTTCTCTCAGCACTCAAGGCACCTACATTGTTCGTGAAGGTGACCCTGTGACTGAAATGCTCTTTATTATCAGAGGTAGATTGGATAGTTCTACTACAAATGGTGGCAGGACTGGTTTCTTCAACTCAATCATATTGAGACCTGGAGATTTTTGTGGTGAGGAACTTCTCTCTTGGGCTTTGCTCCCAAAATCAACCACCAATTTGCCTTCTTCAACTAGGACAGTTAAAGCCCTTGGCGAGGTTGAAGCTTTTGCTCTTCGTGCCGAAGATCTCAAGTTTGTAGCTAACCAGTTTAGGCGCCTCCATAGCAGGAAACTGCAGCACACGTTTCGGTTTTATTCCCACCATTGGAGGACCTGGGCAGCCTGCTTCATTCAGGCTGCATGGCGTAGATATAAGAAGAGGATGCTTGCCAAAGATATCAGTTTGAGGGAATCCATTGCTTTGGACGAGACAGTGTCCATTGAAGGTAAACATGAGGAGGATTATTCTGCTGGCTCAAATTCTTCTCAGGCTAAATTGAACCTTGGGGTCACAATACTTGCTTCAAGGTTTGCTGCTAACACGAAAAGAGGAGCTTTGAAGATTAAAGATGATTTGCCCAAGTTACGGAAACCTGAAGAACCTGACTTTTCAGCTGAAGCTGATGATGATTAG 2124 0.4218 MELKKDKLVRFYTESSSTYKVSSSSLLKTSNALPWGKNRFAETFRIEGSKVFLEDHDAWRKTILDPGSEIVLKWNRVFIISCLVALFLDPLYFYLPSVRGNAGSSSCVRTDTDLRIVVTFLRTIADIFYLLHLLIKFRTAYVAPSSRVFGRGELVMDPKKIATRYIKSDFFIDLIATLPLPQVIWFIIPATRSPQTSHKNNALALIVLLQYVPRLYLIFPLSSQIIKATGVVTKTAWAGAAYNLLLYMLASHVLGAAWYLLSVDRYTTCWKSICKKETNPENCFLYLDCSSLNIKQRMIWANSTNVFNSCDPNKDIDFNYGIFANAMTKNVVSSYFFPKYFYCLWWGLQQLSSYGQNLSTSTFIGETSFSILIAILGLVLFAHLIGNMQTYLQSITLRLEEWRLRRRDTEEWMRHRQLPEDLKRRVQRFVQYKWVATRGVEEEAILHGLPADLRRDIQRHLCLDLVRRVPFFSQMDDQLLDAICERLVSSLSTQGTYIVREGDPVTEMLFIIRGRLDSSTTNGGRTGFFNSIILRPGDFCGEELLSWALLPKSTTNLPSSTRTVKALGEVEAFALRAEDLKFVANQFRRLHSRKLQHTFRFYSHHWRTWAACFIQAAWRRYKKRMLAKDISLRESIALDETVSIEGKHEEDYSAGSNSSQAKLNLGVTILASRFAANTKRGALKIKDDLPKLRKPEEPDFSAEADDD 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4651g00093 707 Gene3D Jelly Rolls 469 589 IPR014710 -
Gabi4651g00093 707 ProSiteProfiles cAMP/cGMP binding motif profile. 471 555 IPR000595 -
Gabi4651g00093 707 Pfam Ion transport protein 74 398 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Gabi4651g00093 707 CDD CAP_ED 471 602 IPR000595 -
Gabi4651g00093 707 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 55 700 - -
Gabi4651g00093 707 SUPERFAMILY Voltage-gated potassium channels 68 393 - -
Gabi4651g00093 707 SMART cnmp_10 471 602 IPR000595 -
Gabi4651g00093 707 FunFam Cyclic nucleotide-gated ion channel 1 469 587 - -
Gabi4651g00093 707 Pfam Cyclic nucleotide-binding domain 494 582 IPR000595 -
Gabi4651g00093 707 Gene3D - 77 396 - -
Gabi4651g00093 707 SUPERFAMILY cAMP-binding domain-like 401 593 IPR018490 -
Gabi4651g00093 707 Gene3D Helix hairpin bin 399 462 - -
Gabi4651g00093 707 PRINTS EAG/ELK/ERG potassium channel family signature 340 357 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gabi4651g00093 707 PRINTS EAG/ELK/ERG potassium channel family signature 384 393 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gabi4651g00093 707 PRINTS EAG/ELK/ERG potassium channel family signature 366 377 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gabi4651g00093 707 PRINTS EAG/ELK/ERG potassium channel family signature 249 259 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gabi4651g00093 707 PRINTS EAG/ELK/ERG potassium channel family signature 434 441 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gabi4651g00093 707 PRINTS EAG/ELK/ERG potassium channel family signature 133 142 IPR003938 GO:0005249|GO:0006813|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4651g00093 Gabi-Chr4651 829982 838318 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4651g00093 1 706 Ion Channels AT4G30360 69.918 0.0 1025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4651g00093 K05391 - gmx:100808425 1205.28