Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4651g00092 ATGCTCTCGAGATCTTGCTTGGGTTTATTGAATTTGGTATCAGTGGATGATTACCAAGCGCTGAGCCGTGTCCCGAAGGTGATGGCGGTGCCCGGAGATGTAGCGGAGTTGGAGATCGACGACGTCGTTTCGTCGGGTACTCAAGAACGGAGGATCATCGTGGCGAACCAGTTGCCGATACGAGCGTGTCGCGACGCGGAGGGGAAGAGATGGAGCTTCGAATGGGACAGTGACAGCCTCGTGCTGCAGCTGAAGGACGGTTTCCCTTCCGACGTGGAGGTTCTGTACGTTGGTTCGTTGAAGGCGGAGATCGACGCGTCGGAACAGGAGGAAGTTGCGCAGGTGCTTCTAGAAAGGTTCCGGTGCGTCCCCACGTTCTTGCCTGCGGATGTTTACAACAGATTCTACCATGGTTTCTGCAAGCATTACCTATGGCCTCTATTTCACTACATGCTTCCTATGTCGCCCAGCCAGGGTGCGCGTTTCGACCGTGCGCAGTGGCAGGCCTACGTGCTTGCTAACAAGATCTTCGCCGATAAGGTCACCGAGGTTATAAACCCCGACGAGGATTACGTTTGGGTCCACGATTATCACCTCATGATCTTGCCCACTTTCTTGAGGAAGCGTTTCCACCGCGTGAAGCTCGGGTTCTTCTTGCACAACACGTTCCCGACGTCGGAAATCTATAGGACGATACCGGTTCGCGATGATATTCTGAGGAGGGGTTACATTGGACTTGACTATTACGGTAGAACCGTGACCATAAAGATTCTCCCCGCTGGAATTCACATGGGCCAGCTTGAATCGGTGTTGTCGTTGCCTCACACTGCTTTTAGGGTCAAGGAGTTGAAGGAGCAGTTTCGGGGGAAGGTTGTGATTTTGGGTGTGGATGACATGGACATTTTCAAAGGTATTAGCTTGAAGTTCTTGGCCATGGGACAGCTTCTGCAACTGCACGAAGATTTAAGGGGTCGAGTGGTTTTGGTTCAGATTCTTAACCCTGCAAGGAGCAGAGGGAAAGATATTCAGGATGTGAAGAACGAGAGCGAGGCCATTGCCAAGGAGATTAACGAGAAATATGGCAAACCTGGGTACCAGCCGATTGTTTTCATCAATGGCCCCGTTTCGACCCAGGAGAAAGCTGCATACTATGCCATATCTGAATGCTGCCTTGTCAATGCTGTGAGGGATGGGATGAATTTGGTGCCTTATACGTACACTGTTTGTAGACAGGGAAGTGTTGCTTTGGACAAGGCACTTGGCGTTGAAGATGGGGCTGTGAGGCCTAAGCATAGTGTTATCGTTGTGTCTGAGTTCATTGGGTGCTCGCCCTCGCTCAGCGGAGCAATACGGGTGAATCCGTGGAACATTGATGATGTCTCGGAGGCCATGAATTCGGCTATCACAATGGCAGAGGCAGAGAAGCAATTACGTCATGAGAAGCATTATAAGTACATAAGCTCTCATGACGTGGCATATTGGGCTAGGAGTTTTGATCAGGATTTAGAGAGAGCTTGTAGAGAGCATTACCTCAAGAGGTGTTGGGGTGTAGGCCTTGGCCTGGGTTTCAGAATTGTTGCTCTGGATCCTACCTTCAGGAAACTTTGTGTGGATAACATTGCCTCTGCCTACAGAGCTACACACAATCGGTTGATCCTTTTGGACTATGATGGCACCATGATGCCGCAGGCCTCAATAAACAAAACTCCAAGCAGTGAAGTTATCTCTGTCTTGAATTATTTATGCAGTGATCCCCAAAATGTAGTCTTTATAGTGAGCGGCAGAGATAGGGATTGCCTAAGCAATTGGTTCTCTCCATGTGAGAAGTTGGGTCTCTCTGCCGAGCACGGTTACTTCACTAGGTGGAGTAAAGATTCTCCTTGGGAGACCTGCGGTTTGACAACCGACTATGATTGGAAAATGATTGCAGAACCCGTGATGGCGCATTATACAGAAGCAACTGACGGTTCTTTCATTGAACACAAGGAAAGCGCAATGGTGTGGCACCATCAACTTGCGGATCCTTCTTTTGGATCAAGCCAAGCCAAAGAGCTTCTTGATCACCTGGAGAGTGTGCTGGCTAATGAGCCAGTAGTGGTTAAAAGGGGACAGCATATAGTTGAAGTTAAACCTCAGGGTGTGAGCAAAGGTATAGTGGTGGAAAATCTTATCTCAACCATGCGAAGTGAGGGAAAGTCACTAGATTTTTTGCTGTGCATAGGAGATGATCGCTCGGATGAAGATATGTTTGAAAGCATTGCTCGTTCAGTTTCTAATCCGGATCTGCCAACCATATCAAAAGTCTTTGCATGCACTGTTGGTCAGAAACCAAGTATGGCTAAATACTATTTGGATGATACTACTGAAGTTATCAAGTTGCTCGAAGGACTTGCAACGGCATCAGCACCACCTACGTCCGTAACTTTTCAGGAATTGCAAGGAACACCATAG 2451 0.4863 MLSRSCLGLLNLVSVDDYQALSRVPKVMAVPGDVAELEIDDVVSSGTQERRIIVANQLPIRACRDAEGKRWSFEWDSDSLVLQLKDGFPSDVEVLYVGSLKAEIDASEQEEVAQVLLERFRCVPTFLPADVYNRFYHGFCKHYLWPLFHYMLPMSPSQGARFDRAQWQAYVLANKIFADKVTEVINPDEDYVWVHDYHLMILPTFLRKRFHRVKLGFFLHNTFPTSEIYRTIPVRDDILRRGYIGLDYYGRTVTIKILPAGIHMGQLESVLSLPHTAFRVKELKEQFRGKVVILGVDDMDIFKGISLKFLAMGQLLQLHEDLRGRVVLVQILNPARSRGKDIQDVKNESEAIAKEINEKYGKPGYQPIVFINGPVSTQEKAAYYAISECCLVNAVRDGMNLVPYTYTVCRQGSVALDKALGVEDGAVRPKHSVIVVSEFIGCSPSLSGAIRVNPWNIDDVSEAMNSAITMAEAEKQLRHEKHYKYISSHDVAYWARSFDQDLERACREHYLKRCWGVGLGLGFRIVALDPTFRKLCVDNIASAYRATHNRLILLDYDGTMMPQASINKTPSSEVISVLNYLCSDPQNVVFIVSGRDRDCLSNWFSPCEKLGLSAEHGYFTRWSKDSPWETCGLTTDYDWKMIAEPVMAHYTEATDGSFIEHKESAMVWHHQLADPSFGSSQAKELLDHLESVLANEPVVVKRGQHIVEVKPQGVSKGIVVENLISTMRSEGKSLDFLLCIGDDRSDEDMFESIARSVSNPDLPTISKVFACTVGQKPSMAKYYLDDTTEVIKLLEGLATASAPPTSVTFQELQGTP 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4651g00092 816 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 50 507 - -
Gabi4651g00092 816 Gene3D Glycogen Phosphorylase B; 39 250 - -
Gabi4651g00092 816 CDD HAD_TPP 551 792 - -
Gabi4651g00092 816 Gene3D - 549 659 IPR023214 -
Gabi4651g00092 816 Gene3D - 679 807 IPR023214 -
Gabi4651g00092 816 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 241 799 IPR001830 GO:0003824|GO:0005992
Gabi4651g00092 816 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 679 810 - -
Gabi4651g00092 816 SUPERFAMILY HAD-like 550 798 IPR036412 -
Gabi4651g00092 816 FunFam Trehalose-6-phosphate synthase 8 45 241 - -
Gabi4651g00092 816 Pfam Glycosyltransferase family 20 245 503 IPR001830 GO:0003824|GO:0005992
Gabi4651g00092 816 Pfam Glycosyltransferase family 20 50 240 IPR001830 GO:0003824|GO:0005992
Gabi4651g00092 816 CDD GT20_TPS 50 503 IPR001830 GO:0003824|GO:0005992
Gabi4651g00092 816 FunFam Trehalose-6-phosphate synthase 2 633 712 - -
Gabi4651g00092 816 Gene3D Glycogen Phosphorylase B; 265 487 - -
Gabi4651g00092 816 NCBIfam HAD-IIB family hydrolase 551 755 IPR006379 -
Gabi4651g00092 816 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 549 666 - -
Gabi4651g00092 816 NCBIfam trehalose-phosphatase 549 798 IPR003337 GO:0003824|GO:0005992
Gabi4651g00092 816 Pfam Trehalose-phosphatase 553 787 IPR003337 GO:0003824|GO:0005992
Gabi4651g00092 816 FunFam Alpha,alpha-trehalose-phosphate synthase 270 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4651g00092 Gabi-Chr4651 822623 825933 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4651g00092 10 814 Trehalose Biosynthesis Gene Families AT2G18700 64.444 0.0 1122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4651g00092 K16055 - qsa:O6P43_022268 1296.18