Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4651g00091 ATGCTCTCGAGATCTTGCTTGGGTTTATTGAATTTGGTATCAGTGGATGATTACCAAGCGCTGAGCCGTGTCCCGAAGGTGATGGCGGTGCCCGGAGATGTAGCGGAGTTGGAGATCGACGACGTCGTTTCGTCGGGTACTCAAGAACGGAGGATCATCGTGGCGAACCAGTTGCCGATACGAGCGTGTCGCGACGCGGAGGGGAAGAGATGGAGCTTCGAATGGGACAGTGACAGCCTCGTGCTGCAGCTGAAGGACGGTTTCCCTTCCGACGTGGAGGTTCTGTACGTTGGTTCGTTGAAGGCGGAGATCGACGCGTCGGAACAGGAGGAAGTTGCGCAGGTGCTTCTAGAAAGGTTCCGGTGCGTCCCCACGTTCTTGCCTGCGGATGTTTACAACAGATTCTACCATGGTTTCTGCAAGCATTACCTATGGCCTCTATTTCACTACATGCTTCCTATGTCGCCCAGCCAGGGTGCGCGTTTCGACCGTGCGCAGTGGCAGGCCTACGTGCTTGCTAACAAGATCTTCGCCGATAAGGTCACCGAGGTTATAAACCCCGACGAGGATTACGTTTGGGTCCACGATTATCACCTCATGATCTTGCCCACTTTCTTGAGGAAGCGTTTCCACCGCGTGAAGCTCGGGTTCTTCTTGCACAACACGTTCCCGACGTCGGAAATCTATAGGACGATACCGGTTCGCGATGATATTCTGAGGGCCTTCTTGAATTGCGATTTGATTGGGTTCCACACTTTCGATTACGCGCGGCATTTTTTGTCTTGTTGTAGCAGGATGTTGGGTTTGGATTATGAGTCCAAGAGGGGTTACATTGGACTTGACTATTACGGTAGAACCGTGACCATAAAGATTCTCCCCGCTGGAATTCACATGGGCCAGCTTGAATCGGTGTTGTCGTTGCCTCACACTGCTTTTAGGGTCAAGGAGTTGAAGGAGCAGTTTCGGGGGAAGGTTGTGATTTTGGGTGTGGATGACATGGACATTTTCAAAGGTATTAGCTTGAAGTTCTTGGCCATGGGACAGCTTCTGCAACTGCACGAAGATTTAAGGGGTCGAGTGGTTTTGGTTCAGATTCTTAACCCTGCAAGGAGCAGAGGGAAAGATATTCAGGATGTGAAGAACGAGAGCGAGGCCATTGCCAAGGAGATTAACGAGAAATATGGCAAACCTGGGTACCAGCCGATTGTTTTCATCAATGGCCCCGTTTCGACCCAGGAGAAAGCTGCATACTATGCCATATCTGAATGCTGCCTTGTCAATGCTGTGAGGGATGGGATGAATTTGGTGCCTTATACGTACACTGTTTGTAGACAGGGAAGTGTTGCTTTGGACAAGGCACTTGGCGTTGAAGATGGGGCTGTGAGGCCTAAGCATAGTGTTATCGTTGTGTCTGAGTTCATTGGGTGCTCGCCCTCGCTCAGCGGAGCAATACGGGTGAATCCGTGGAACATTGATGATGTCTCGGAGGCCATGAATTCGGCTATCACAATGGCAGAGGCAGAGAAGCAATTACGTCATGAGAAGCATTATAAGTACATAAGCTCTCATGACGTGGCATATTGGGCTAGGAGTTTTGATCAGGATTTAGAGAGAGCTTGTAGAGAGCATTACCTCAAGAGGTGTTGGGGTGTAGGCCTTGGCCTGGGTTTCAGAATTGTTGCTCTGGATCCTACCTTCAGGAAACTTTGTGTGGATAACATTGCCTCTGCCTACAGAGCTACACACAATCGGTTGATCCTTTTGGACTATGATGGCACCATGATGCCGCAGGCCTCAATAAACAAAACTCCAAGCAGTGAAGTTATCTCTGTCTTGAATTATTTATGCAGTGATCCCCAAAATGTAGTCTTTATAGTGAGCGGCAGAGATAGGGATTGCCTAAGCAATTGGTTCTCTCCATGTGAGAAGTTGGGTCTCTCTGCCGAGCACGGTTACTTCACTAGGTGGAGTAAAGATTCTCCTTGGGAGACCTGCGGTTTGACAACCGACTATGATTGGAAAATGATTGCAGAACCCGTGATGGCGCATTATACAGAAGCAACTGACGGTTCTTTCATTGAACACAAGGAAAGCGCAATGGTGTGGCACCATCAACTTGCGGATCCTTCTTTTGGATCAAGCCAAGCCAAAGAGCTTCTTGATCACCTGGAGAGTGTGCTGGCTAATGAGCCAGTAGTGGTTAAAAGGGGACAGCATATAGTTGAAGTTAAACCTCAGGGTGTGAGCAAAGGTATAGTGGTGGAAAATCTTATCTCAACCATGCGAAGTGAGGGAAAGTCACTAGATTTTTTGCTGTGCATAGGAGATGATCGCTCGGATGAAGATATGTTTGAAAGCATTGCTCGTTCAGTTTCTAATCCGGATCTGCCAACCATATCAAAAGTCTTTGCATGCACTGTTGGTCAGAAACCAAGTATGGCTAAATACTATTTGGATGATACTACTGAAGTTATCAAGTTGCTCGAAGGACTTGCAACGGCATCAGCACCACCTACGTCCGTAACTTTTCAGGAATTGCAAGGAACACCATAG 2553 0.4845 MLSRSCLGLLNLVSVDDYQALSRVPKVMAVPGDVAELEIDDVVSSGTQERRIIVANQLPIRACRDAEGKRWSFEWDSDSLVLQLKDGFPSDVEVLYVGSLKAEIDASEQEEVAQVLLERFRCVPTFLPADVYNRFYHGFCKHYLWPLFHYMLPMSPSQGARFDRAQWQAYVLANKIFADKVTEVINPDEDYVWVHDYHLMILPTFLRKRFHRVKLGFFLHNTFPTSEIYRTIPVRDDILRAFLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLDYYGRTVTIKILPAGIHMGQLESVLSLPHTAFRVKELKEQFRGKVVILGVDDMDIFKGISLKFLAMGQLLQLHEDLRGRVVLVQILNPARSRGKDIQDVKNESEAIAKEINEKYGKPGYQPIVFINGPVSTQEKAAYYAISECCLVNAVRDGMNLVPYTYTVCRQGSVALDKALGVEDGAVRPKHSVIVVSEFIGCSPSLSGAIRVNPWNIDDVSEAMNSAITMAEAEKQLRHEKHYKYISSHDVAYWARSFDQDLERACREHYLKRCWGVGLGLGFRIVALDPTFRKLCVDNIASAYRATHNRLILLDYDGTMMPQASINKTPSSEVISVLNYLCSDPQNVVFIVSGRDRDCLSNWFSPCEKLGLSAEHGYFTRWSKDSPWETCGLTTDYDWKMIAEPVMAHYTEATDGSFIEHKESAMVWHHQLADPSFGSSQAKELLDHLESVLANEPVVVKRGQHIVEVKPQGVSKGIVVENLISTMRSEGKSLDFLLCIGDDRSDEDMFESIARSVSNPDLPTISKVFACTVGQKPSMAKYYLDDTTEVIKLLEGLATASAPPTSVTFQELQGTP 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4651g00091 850 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 583 700 - -
Gabi4651g00091 850 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 50 541 - -
Gabi4651g00091 850 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 713 844 - -
Gabi4651g00091 850 NCBIfam HAD-IIB family hydrolase 585 789 IPR006379 -
Gabi4651g00091 850 Pfam Glycosyltransferase family 20 50 537 IPR001830 GO:0003824|GO:0005992
Gabi4651g00091 850 Gene3D - 583 693 IPR023214 -
Gabi4651g00091 850 Gene3D - 713 841 IPR023214 -
Gabi4651g00091 850 SUPERFAMILY HAD-like 584 832 IPR036412 -
Gabi4651g00091 850 Gene3D Glycogen Phosphorylase B; 39 303 - -
Gabi4651g00091 850 CDD HAD_TPP 585 826 - -
Gabi4651g00091 850 Pfam Trehalose-phosphatase 587 821 IPR003337 GO:0003824|GO:0005992
Gabi4651g00091 850 NCBIfam trehalose-phosphatase 583 832 IPR003337 GO:0003824|GO:0005992
Gabi4651g00091 850 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 45 833 IPR001830 GO:0003824|GO:0005992
Gabi4651g00091 850 FunFam Alpha,alpha-trehalose-phosphate synthase 304 521 - -
Gabi4651g00091 850 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 43 302 - -
Gabi4651g00091 850 CDD GT20_TPS 50 537 IPR001830 GO:0003824|GO:0005992
Gabi4651g00091 850 Gene3D Glycogen Phosphorylase B; 304 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4651g00091 Gabi-Chr4651 822623 825933 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4651g00091 10 848 Trehalose Biosynthesis Gene Families AT2G18700 68.187 0.0 1211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4651g00091 K16055 - gmx:100810498 1484.93