Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4651g00024 ATGGCGACAAAGGAAGGCAAAGCCATAGGCATAGACCTTGGCACCACATACAGCTGCGTCGGCGTGTGGCAAAACGACCGCGTTGAGATCATTCCAAATGACCAAGGCAACAGAACCACCCCCTCCTACGTTGCCTTCACCGACACAGAGAGGCTGATCGGCGATGCGGCGAAGAATCAAGTGGCCATGAATCCACAGAACACCGTTTTCGACGCCAAGCGTTTGATCGGTAGGAAACTCTCCGACCCATCGGTTCAGAACGACATGAAGTTATGGCCGTTTAAGGTTGTAGCAGGCCCTGGCGACAAACCAATGATCGTGGTGAATTACAAGGGCGAGGAGAAAAAATTCTCAGCTGAAGAGATATCTTCGATGGTGTTGACGAAGATGAGGGAGGTAGCAGAAGCGTTTCTGGGTCATCCAGTGAAGAACGCTGTGATCACTGTCCCTGCTTATTTCAACGATTCTCAGAGGCAAGCCACTAAGGATGCAGGGGCTATTTCTGGTATGAACGTGTTGAGAATCATTAACGAACCCACTGCTGCTGCTATTGCTTATGGTTTGGACAAGAAGGCTTCGAGAAAAGGTGAGCAGAACGTGCTTATTTTCGATTTGGGTGGTGGCACTTTTGATGTTTCTATTTTGACCATTGAGGAAGGGATTTTTGAGGTGAAGGCCACTGCTGGTGATACTCATCTTGGTGGTGAAGATTTTGATAATAGGATGGTGAATCATTTTGTGTCCGAGTTCAGGAGGAAGAACAAGAAGGATATTAGTGGGAATGCTAGAGCTCTGAGAAGGTTGAGGACAGCGTGTGAGAGGGCTAAGAGGACTTTGTCTTCCACTGCTCAAACAACCATTGAAATCGATTCCTTATATGAAGGGATTGATTTCTATGCTACAATCACCAGGGCTAGGTTTGAGGAACTGAACATGGATTTGTTCAGGAAGTGCATGGAGCCTGTGGAGAAGTGTCTGCGTGATGCAAAGATTGATAAGAGTCAGGTTCATGAGGTTGTTCTTGTTGGAGGGTCAACTAGAATTCCAAAGGTTCAGCAACTCTTGCAGGATTTCTTCAACGGGAAAGAGCTCTGCAAGAGTATTAACCCTGATGAAGCTGTTGCATATGGTGCAGCTGTTCAAGCTGCGATCTTGAGCGGTGAAGGAGACGAGAAGATGGTTAAGGATGCTGAGAGGTACAAGGCAGAGGATGAGGAGGTGAAGAAGAAAGTGGAAGCCAAGAACTCACTTGAGAATTACGCGTACAACATGAGGAACACGATTAAGGATGAGAAGATTGGTGGGAAGTTGAGCCCTGACGAGAAGGAGAAGATTGAGAAGGCAGTTGAAGATGCCATACAGTGGTTGGAAGGAAACCAATTGGCTGAAGTGGAAGAGTTTGAGGACAAGCAGAAGGAGTTGGAAGGTATATGCAATCCCGTCATTGCCAAGATGTATCAGGGTGGTGGTGCTGGTGGAGGAGATGTGCCAATGGGTGATGACATGCCTGGTGGTGGGTCTGCTGGGTCGGGTTCTGGACCTGGACCCAAGATCGAAGAAGTTGATTGA 1569 0.478 MATKEGKAIGIDLGTTYSCVGVWQNDRVEIIPNDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRKLSDPSVQNDMKLWPFKVVAGPGDKPMIVVNYKGEEKKFSAEEISSMVLTKMREVAEAFLGHPVKNAVITVPAYFNDSQRQATKDAGAISGMNVLRIINEPTAAAIAYGLDKKASRKGEQNVLIFDLGGGTFDVSILTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVSEFRRKNKKDISGNARALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDAKIDKSQVHEVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGDEKMVKDAERYKAEDEEVKKKVEAKNSLENYAYNMRNTIKDEKIGGKLSPDEKEKIEKAVEDAIQWLEGNQLAEVEEFEDKQKELEGICNPVIAKMYQGGGAGGGDVPMGDDMPGGGSAGSGSGPGPKIEEVD 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4651g00024 522 ProSitePatterns Heat shock hsp70 proteins family signature 1. 11 18 IPR018181 -
Gabi4651g00024 522 Gene3D - 191 365 - -
Gabi4651g00024 522 Gene3D - 408 522 IPR029048 -
Gabi4651g00024 522 FunFam Heat shock 70 kDa protein 196 259 - -
Gabi4651g00024 522 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 412 493 IPR029048 -
Gabi4651g00024 522 FunFam Heat shock cognate 70 kDa protein 2 318 365 - -
Gabi4651g00024 522 FunFam Heat shock 70 kDa 234 317 - -
Gabi4651g00024 522 Gene3D - 9 383 - -
Gabi4651g00024 522 Gene3D Actin; Chain A, domain 4 234 317 - -
Gabi4651g00024 522 FunFam heat shock cognate 70 kDa protein-like 414 488 - -
Gabi4651g00024 522 Gene3D - 70 125 - -
Gabi4651g00024 522 MobiDBLite consensus disorder prediction 488 522 - -
Gabi4651g00024 522 ProSitePatterns Heat shock hsp70 proteins family signature 2. 202 215 IPR018181 -
Gabi4651g00024 522 SUPERFAMILY Actin-like ATPase domain 195 387 IPR043129 -
Gabi4651g00024 522 ProSitePatterns Heat shock hsp70 proteins family signature 3. 339 353 IPR018181 -
Gabi4651g00024 522 PRINTS 70kDa heat shock protein signature 368 388 - -
Gabi4651g00024 522 PRINTS 70kDa heat shock protein signature 7 20 - -
Gabi4651g00024 522 PRINTS 70kDa heat shock protein signature 57 65 - -
Gabi4651g00024 522 PRINTS 70kDa heat shock protein signature 145 165 - -
Gabi4651g00024 522 PRINTS 70kDa heat shock protein signature 208 218 - -
Gabi4651g00024 522 PRINTS 70kDa heat shock protein signature 336 352 - -
Gabi4651g00024 522 PRINTS 70kDa heat shock protein signature 35 47 - -
Gabi4651g00024 522 PANTHER HEAT SHOCK PROTEIN 70KDA 8 387 IPR013126 GO:0005524|GO:0140662
Gabi4651g00024 522 SUPERFAMILY Actin-like ATPase domain 7 190 IPR043129 -
Gabi4651g00024 522 Pfam Hsp70 protein 391 487 IPR013126 GO:0005524|GO:0140662
Gabi4651g00024 522 Pfam Hsp70 protein 8 389 IPR013126 GO:0005524|GO:0140662
Gabi4651g00024 522 FunFam Heat shock 70 kDa protein 70 125 - -
Gabi4651g00024 522 CDD HSPA1-2_6-8-like_NBD 8 386 - -
Gabi4651g00024 522 FunFam Heat shock protein 70 9 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4651g00024 Gabi-Chr4651 249419 251679 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4651g00024 5 522 Calmodulin-binding Proteins AT5G02500 83.493 0.0 885
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4651g00024 K03283 - csin:114277576 789.26